Paper · 2022 · MPG.PuRe (Max Planck Society)

LIDAR-based phenotyping for drought response and drought tolerance in potato

Mulugeta Aneley, G.; Haas, M.; Koehl, K.

8
claims
16
verbatim quotes
0
citations
3
research areas
—
Not open access

Abstract

As climate changes, maintenance of yield stability requires efficient selection for drought tolerance. Drought-tolerant cultivars have been successfully but slowly bred by yield-based selection in arid environments. Marker-assisted selection accelerates breeding but is less effective for polygenic traits. Therefore, we investigated a selection based on phenotypic markers derived from automatic phenotyping systems. Our trial comprised 64 potato genotypes previously characterised for drought tolerance in ten trials representing Central European drought stress scenarios. In two trials, an automobile LIDAR system continuously monitored shoot development under optimal (C) and reduced (S) water supply. Six 3D images per day provided time courses of plant height (PH), leaf area (A3D), projected leaf area (A2D) and leaf angle (LA). The evaluation workflow employed logistic regression to estimate initial slope (k), inflection point (Tm) and maximum (Mx) for the growth curves of PH and A2D. Genotype × environment interaction affected all parameters significantly. Tm(A2D)s and Mx(A2D)s correlated significantly positive with drought tolerance, and Mx(PH)s correlated negatively. Drought tolerance was not associated with LAc, but correlated significantly with the LAs during late night and at dawn. Drought-tolerant genotypes had a lower LAs than drought-sensitive genotypes, thus resembling unstressed plants. The decision tree model selected Tm(A2D)s and Mx(PH)c as the most important parameters for tolerance class prediction. The model predicted sensitive genotypes more reliably than tolerant genotype and may thus complement the previously published model based on leaf metabolites/transcripts.

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Claims 8

Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Genotype by environment interaction significantly affected all parameters.

Material
Genotypee0
Outcome
all parameterse0
Setting
environmente0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Genotype × environment interaction affected all parameters significantly”

✓ located verbatim in the source · abstract, characters 996–1068 · show in text ↑
t0

“in potato”

✓ located verbatim in the source · title, characters 67–76 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Tm(A2D)s correlated positively with drought tolerance.

Material
Tm(A2D)se0
Outcome
drought tolerancee0
Direction
positivee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Tm(A2D)s and Mx(A2D)s correlated significantly positive with drought tolerance”

✓ located verbatim in the source · abstract, characters 1070–1148 · show in text ↑
t0

“in potato”

✓ located verbatim in the source · title, characters 67–76 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Mx(A2D)s correlated positively with drought tolerance.

Material
Mx(A2D)se0
Outcome
drought tolerancee0
Direction
positivee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Tm(A2D)s and Mx(A2D)s correlated significantly positive with drought tolerance”

✓ located verbatim in the source · abstract, characters 1070–1148 · show in text ↑
t0

“in potato”

✓ located verbatim in the source · title, characters 67–76 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Mx(PH)s correlated negatively with drought tolerance.

Material
Mx(PH)se0
Outcome
drought tolerancee0
Direction
negativelye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Tm(A2D)s and Mx(A2D)s correlated significantly positive with drought tolerance, and Mx(PH)s correlated negatively”

✓ located verbatim in the source · abstract, characters 1070–1183 · show in text ↑
t0

“in potato”

✓ located verbatim in the source · title, characters 67–76 · show in text ↑
Associationobservedoriginal resultno effectmeasured

Claim · model-written summary

Drought tolerance was not associated with LAc.

Material
LAce0
Outcome
Drought tolerancee0
Direction
not associatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Drought tolerance was not associated with LAc”

✓ located verbatim in the source · abstract, characters 1185–1230 · show in text ↑
t0

“in potato”

✓ located verbatim in the source · title, characters 67–76 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Drought-tolerant genotypes had lower LAs than drought-sensitive genotypes.

Material
Drought-tolerant genotypese0
Outcome
LAse0
Direction
lowere0
Comparator
drought-sensitive genotypese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Drought-tolerant genotypes had a lower LAs than drought-sensitive genotypes, thus resembling unstressed plants”

✓ located verbatim in the source · abstract, characters 1305–1415 · show in text ↑
t0

“in potato”

✓ located verbatim in the source · title, characters 67–76 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

A decision tree selected Tm(A2D)s and Mx(PH)c as the most important predictors.

Outcome
tolerance class predictione0
Comparator
Tm(A2D)s and Mx(PH)ce0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The decision tree model selected Tm(A2D)s and Mx(PH)c as the most important parameters for tolerance class prediction”

✓ located verbatim in the source · abstract, characters 1417–1534 · show in text ↑
t0

“in potato”

✓ located verbatim in the source · title, characters 67–76 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The model predicted sensitive genotypes more reliably than tolerant genotype.

Outcome
predicted sensitive genotypese0
Direction
more reliablye0
Comparator
tolerant genotypee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The model predicted sensitive genotypes more reliably than tolerant genotype”

✓ located verbatim in the source · abstract, characters 1536–1612 · show in text ↑
t0

“in potato”

✓ located verbatim in the source · title, characters 67–76 · show in text ↑