Paper · 2009 · DOAJ (DOAJ: Directory of Open Access Journals)

Cloning and prokaryotic expression of rice gene encoding β-caryophyllene synthase and its genetic transformation.

Ge LinQuan; Zhou Guoxin; Qi Wang; et al.

8
claims
15
verbatim quotes
0
citations
3
research areas
—
Not open access

Abstract

To elucidate the role of β-caryophyllene emitted from rice plants in mediating interactions among rice, herbivores and their natural enemies, a rice β-caryophyllene synthase gene OsCAS was cloned, expressed in E. coli and over-expressed or silenced in rice plants using an Agrobacterium-based transformation system. The gene OsCAS, a 1731 bp cDNA, contains an open reading frame of 1728 bp, which encodes a protein of 576 amino acids with a calculated molecular weight of 66.5 kDa. Phylogenetic tree analysis showed that the putative rice OsCAS had a high amino acid identity (99%) to maize (Zea mays) β-caryophyllene synthase, whereas a low amino acid identity (51%) to those in other plants including Arabodopsis (Arabidopsis thaliana), Artemisia (Artemisia annua) and cucumber (Cucumis sativus). Infestation by rice brown planthopper Nilaparvata lugens (Stål) or jasmonic acid treatment enhanced significantly the expression levels of OsCAS gene. The recombinant OsCAS protein was expressed in E. coli and rice lines with over-expression or RNAi silencing of OsCAS gene were obtained by A grobacterium-mediated transformation, which laid a foundation for elucidating the biochemical and ecological functions of OsCAS.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Rice OsCAS cDNA was 1731 bp with a 1728 bp open reading frame.

Taxon
rice plantsOryza sativae1
Gene
OsCASe0
Outcome
cDNAe0
Value
1731 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The gene OsCAS, a 1731 bp cDNA, contains an open reading frame of 1728 bp”

✓ located verbatim in the source · abstract, characters 316–389 · show in text ↑
e1

“silenced in rice plants using an Agrobacterium-based transformation system.”

✓ located verbatim in the source · abstract, characters 240–315 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsCAS encoded 576 amino acids with calculated molecular weight 66.5 kDa.

Taxon
rice plantsOryza sativae2
Gene
OsCASe1
Outcome
proteine0
Value
576 amino acidse0
Qualifier
66.5 kDae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“encodes a protein of 576 amino acids with a calculated molecular weight of 66.5 kDa”

✓ located verbatim in the source · abstract, characters 397–480 · show in text ↑
e1

“The gene OsCAS”

✓ located verbatim in the source · abstract, characters 316–330 · show in text ↑
e2

“silenced in rice plants using an Agrobacterium-based transformation system.”

✓ located verbatim in the source · abstract, characters 240–315 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Rice OsCAS had 99% amino acid identity to maize β-caryophyllene synthase.

Gene
OsCASe0
Outcome
amino acid identitye0
Direction
highe0
Value
99%e0
Comparator
maize (Zea mays) β-caryophyllene synthasee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“rice OsCAS had a high amino acid identity (99%) to maize (Zea mays) β-caryophyllene synthase”

✓ located verbatim in the source · abstract, characters 534–626 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Rice OsCAS had 51% amino acid identity to synthases in other plants.

Gene
OsCASe1
Outcome
amino acid identitye0
Direction
lowe0
Value
51%e0
Comparator
other plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“low amino acid identity (51%) to those in other plants including Arabodopsis (Arabidopsis thaliana), Artemisia (Artemisia annua) and cucumber (Cucumis sativus)”

✓ located verbatim in the source · abstract, characters 638–797 · show in text ↑
e1

“rice OsCAS”

✓ located verbatim in the source · abstract, characters 534–544 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Brown planthopper infestation significantly enhanced OsCAS expression.

Treatment
Infestation by rice brown planthopper Nilaparvata lugens (Stål)e0
Interactor
Nilaparvata lugens (Stål)Nilaparvata lugense0pest
Gene
OsCASe0
Outcome
expression levels of OsCAS genee0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Nilaparvata lugens
Nilaparvata lugens · InteractorNatasha Wright, Florida Department of Agriculture and Consumer Services, Bugwood.org - See more at: http://www.forestryimages.org/browse/detail.cfm?imgnum=51900 · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Infestation by rice brown planthopper Nilaparvata lugens (Stål) or jasmonic acid treatment enhanced significantly the expression levels of OsCAS gene.”

✓ located verbatim in the source · abstract, characters 799–949 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Jasmonic acid significantly enhanced OsCAS expression.

Taxon
rice plantsOryza sativae1
Treatment
jasmonic acid treatmente0
Gene
OsCASe0
Outcome
expression levels of OsCAS genee0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“jasmonic acid treatment enhanced significantly the expression levels of OsCAS gene.”

✓ located verbatim in the source · abstract, characters 866–949 · show in text ↑
e1

“silenced in rice plants using an Agrobacterium-based transformation system.”

✓ located verbatim in the source · abstract, characters 240–315 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Recombinant OsCAS protein was expressed in E. coli.

Taxon
rice plantsOryza sativae1
Gene
OsCASe0
Outcome
recombinant OsCAS protein was expressed in E. colie0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The recombinant OsCAS protein was expressed in E. coli”

✓ located verbatim in the source · abstract, characters 950–1004 · show in text ↑
e1

“silenced in rice plants using an Agrobacterium-based transformation system.”

✓ located verbatim in the source · abstract, characters 240–315 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Rice lines overexpressing or silencing OsCAS were obtained.

Taxon
rice plantsOryza sativae1
Gene
OsCASe0
Outcome
rice lines with over-expression or RNAi silencing of OsCAS genee0
Value
rice linese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“rice lines with over-expression or RNAi silencing of OsCAS gene were obtained by A grobacterium-mediated transformation”

✓ located verbatim in the source · abstract, characters 1009–1128 · show in text ↑
e1

“silenced in rice plants using an Agrobacterium-based transformation system.”

✓ located verbatim in the source · abstract, characters 240–315 · show in text ↑

Nilaparvata lugens · molecular: expression · Oryza sativa (rice)Positive and negative results

9 papers: 6 positive, 3 negative or no effect

2 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

infection · molecular: expression · Oryza sativa (rice)Positive and negative results

57 papers: 41 positive, 16 negative or no effect

15 papers in the same direction as this paper · 41 in the opposite direction

  1. positive
  2. positive
  3. positive

53 papers more in this group

See all 57 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.