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interacting_group: Viruses ✕

Observationobservedoriginal resultmeasured

Claim · model-written summary

Nicotiana benthamiana supported high PVY RNA accumulation.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
potato virus YPotato virus Yt0pathogen
Outcome
viral RNA accumulatione0
Direction
highe0

Verbatim

t0

“two isolates of potato virus Y”

✓ located verbatim in the source · title, characters 53–83
e0

“benthamiana supports high viral RNA accumulation and genetically stable diversity”

✓ located verbatim in the source · abstract, characters 681–762
e1

“Bentham’s tobacco (Nicotiana benthamiana)”

✓ located verbatim in the source · abstract, characters 405–446

Title

Experimental evolution of the host range dynamics in two isolates of potato virus Y

Ivair J Morais; João M F Silva; Alice K Inoue-Nagata; et al. Virus Evolution 2026. doi:10.1093/ve/veag010

Other claims from this paper (9)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Nicotiana benthamiana supported genetically stable viral diversity, consistent with large effective population sizes.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
potato virus YPotato virus Yt0pathogen
Outcome
genetically stable diversitye0

Verbatim

t0

“two isolates of potato virus Y”

✓ located verbatim in the source · title, characters 53–83
e0

“benthamiana supports high viral RNA accumulation and genetically stable diversity”

✓ located verbatim in the source · abstract, characters 681–762
e1

“Bentham’s tobacco (Nicotiana benthamiana)”

✓ located verbatim in the source · abstract, characters 405–446

Title

Experimental evolution of the host range dynamics in two isolates of potato virus Y

Ivair J Morais; João M F Silva; Alice K Inoue-Nagata; et al. Virus Evolution 2026. doi:10.1093/ve/veag010

Other claims from this paper (9)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Potato created strong bottlenecks for PVY, often leading to viral lineage extinction and increased mutation fixation through genetic drift.

Interactor
potato virus YPotato virus Yt0pathogen
Outcome
viral lineage extinction and increased mutation fixatione0

Verbatim

t0

“two isolates of potato virus Y”

✓ located verbatim in the source · title, characters 53–83
e0

“potato creates strong bottlenecks, often leading to viral lineage extinction and increased mutation fixation due to genetic drift”

✓ located verbatim in the source · abstract, characters 827–956

Title

Experimental evolution of the host range dynamics in two isolates of potato virus Y

Ivair J Morais; João M F Silva; Alice K Inoue-Nagata; et al. Virus Evolution 2026. doi:10.1093/ve/veag010

Other claims from this paper (9)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Tomato served as an intermediate host for PVY, with outcomes varying by virus strain.

Interactor
potato virus YPotato virus Yt0pathogen
Outcome
outcomes varying by virus straine0

Verbatim

t0

“two isolates of potato virus Y”

✓ located verbatim in the source · title, characters 53–83
e0

“Tomato served as an intermediate host, with outcomes varying by virus strain”

✓ located verbatim in the source · abstract, characters 958–1034

Title

Experimental evolution of the host range dynamics in two isolates of potato virus Y

Ivair J Morais; João M F Silva; Alice K Inoue-Nagata; et al. Virus Evolution 2026. doi:10.1093/ve/veag010

Other claims from this paper (9)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Tomato acted as a sink host for some PVY lineages, resulting in unsuccessful infection in the next passage.

Interactor
potato virus YPotato virus Yt0pathogen
Outcome
unsuccessful infection in the next passagee1

Verbatim

t0

“two isolates of potato virus Y”

✓ located verbatim in the source · title, characters 53–83
e0

“Tomato served as an intermediate host”

✓ located verbatim in the source · abstract, characters 958–995
e1

“acted as a sink host for some lineages, resulting in unsuccessful infection in the next passage”

✓ located verbatim in the source · abstract, characters 1040–1135

Title

Experimental evolution of the host range dynamics in two isolates of potato virus Y

Ivair J Morais; João M F Silva; Alice K Inoue-Nagata; et al. Virus Evolution 2026. doi:10.1093/ve/veag010

Other claims from this paper (9)
Observationobservedoriginal resultmeasured

Claim · model-written summary

Only a few late-passage N. benthamiana PVY lineages showed elevated pN/pS ratios, indicating that positive selection was rare and not consistently replicated.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
potato virus YPotato virus Yt0pathogen
Outcome
πN/πS ratiose0
Direction
elevatede0

Verbatim

t0

“two isolates of potato virus Y”

✓ located verbatim in the source · title, characters 53–83
e1

“Bentham’s tobacco (Nicotiana benthamiana)”

✓ located verbatim in the source · abstract, characters 405–446
e0

“Only a few late-passage benthamiana lineages displayed elevated πN/πS ratios, indicating that positive selection was rare and not consistently replicated”

✓ located verbatim in the source · abstract, characters 1331–1484

Title

Experimental evolution of the host range dynamics in two isolates of potato virus Y

Ivair J Morais; João M F Silva; Alice K Inoue-Nagata; et al. Virus Evolution 2026. doi:10.1093/ve/veag010

Other claims from this paper (9)
Associationobservedoriginal resultmeasured

Claim · model-written summary

Virus accumulation of blackberry chlorotic ringspot virus in Munger black raspberry was over 4.4 × 10 5 -fold higher than in Natchez blackberry, based on a model-derived estimate averaged across sampling time points.

Taxon
RubusRubust0
Material
Mungere1
Interactor
blackberry chlorotic ringspot virusBlackberry chlorotic ringspot virust0pathogen
Outcome
virus accumulatione1
Direction
highere1
Value
4.4 × 10 5 -folde1
Comparator
Natcheze1

Verbatim

t0

“blackberry chlorotic ringspot virus in two Rubus species”

✓ located verbatim in the source · title, characters 46–102
e1

“virus accumulation in ‘Munger’ is over 4.4 × 10 5 -fold higher than in ‘Natchez”

✓ located verbatim in the source · abstract, characters 715–794

Title

Host-dependent virus accumulation dynamics of blackberry chlorotic ringspot virus in two Rubus species

Andrea Sierra-Mejia; Richard Adams; Ioannis E. Tzanetakis Virology Journal 2026. doi:10.1186/s12985-026-03092-7

Other claims from this paper (2)
Mechanismauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The authors conclude that host genotype plays a key role in supporting virus replication.

Taxon
RubusRubust0
Interactor
blackberry chlorotic ringspot virusBlackberry chlorotic ringspot virust0pathogen
Outcome
virus replicatione1
Qualifier
host genotypee1

Verbatim

t0

“blackberry chlorotic ringspot virus in two Rubus species”

✓ located verbatim in the source · title, characters 46–102
e1

“providing evidence that the host genotype plays a key role in supporting virus replication”

✓ located verbatim in the source · abstract, characters 869–959

Title

Host-dependent virus accumulation dynamics of blackberry chlorotic ringspot virus in two Rubus species

Andrea Sierra-Mejia; Richard Adams; Ioannis E. Tzanetakis Virology Journal 2026. doi:10.1186/s12985-026-03092-7

Other claims from this paper (2)
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Both CaMV and TuYV enhanced aphid dispersal after acquisition.

Taxon
aphide0
Treatment
Both virusese0
Interactor
virusesVirusese0pathogen
Outcome
aphid dispersale0
Direction
enhancede0

Not reportedComparator

Verbatim

e0

“Both viruses enhanced aphid dispersal after acquisition”

✓ located verbatim in the source · abstract, characters 1133–1188

Title

The viral transmission mode conditions host plant-mediated post-acquisition effects on vectors to allow optimal dissemination

Maxime Verdier; Raymonde Baltenweck; Lise Negrel; et al. Plant Stress 2026. doi:10.1016/j.stress.2026.101311

Other claims from this paper (4)
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Only CaMV, not TuYV, increased aphid motility after acquisition.

Taxon
aphide0
Treatment
CaMVe0
Interactor
CaMVCauliflower mosaic viruse0pathogen
Outcome
aphid motilitye0
Direction
increasede0

Not reportedComparator

Verbatim

e0

“only CaMV increased aphid motility”

✓ located verbatim in the source · abstract, characters 1199–1233

Title

The viral transmission mode conditions host plant-mediated post-acquisition effects on vectors to allow optimal dissemination

Maxime Verdier; Raymonde Baltenweck; Lise Negrel; et al. Plant Stress 2026. doi:10.1016/j.stress.2026.101311

Other claims from this paper (4)

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