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Organism names are matched through NCBI Taxonomy: “codon” → Codon. Claims whose organism was placed there count as matches whatever the abstract calls it (maize, corn, Zea mays).
Claim · model-written summary
The CRSCU calculator helps identify the most suitable codon usage pattern among two or more species.
Verbatim
e1“The CRSCU calculator helps determine the most suitable codon usage pattern among two or more species”
t0“crop plants”
Title
Scaled codon usage similarity index: A comprehensive resource for crop plants
Taniya Bargoti; Divya Pratap Nain; Rajesh Kumar; et al. Journal of Genetic Engineering and Biotechnology 2024. doi:10.1016/j.jgeb.2024.100441
Claim · model-written summary
For the same expression pattern, long-protein genes appear under lower codon-usage selection than short-protein genes.
Verbatim
e0“for a same-expression pattern, the selective pressure on codon usage appears to be lower in genes encoding long rather than short proteins.”
t0“Arabidopsis”
Title
Duret, Laurent; Mouchiroud, Dominique HAL (Le Centre pour la Communication Scientifique Directe) 1999
Claim · model-written summary
Arachis hypogaea codon usage most closely resembles L. japonicus.
Arachis hypogaeae0Verbatim
e0“The codon usage pattern for Arachis hypogaea most closely resembles that of L. japonicus”
Title
Analysis of genomic sequences from peanut ( Arachis hypogaea )
Jayashree, B.; Ferguson, Morag; Ilut, Dan; et al. Open Access Repository of ICRISAT (International Crops Research Institute for the Semi-Arid Tropics) 2005
Claim · model-written summary
Maize codon bias followed the monocot pattern.
Verbatim
e0“Maize and soybean codon bias were examined separately and followed the monocot and dicot codon usage patterns respectively”
Title
Elizabeth E. Murray; Jeff Lotzer; Mary Eberle Nucleic Acids Research 1989. doi:10.1093/nar/17.2.477
Claim · model-written summary
Soybean codon bias followed the dicot pattern.
Glycine maxe0Verbatim
e0“Maize and soybean codon bias were examined separately and followed the monocot and dicot codon usage patterns respectively”
Title
Elizabeth E. Murray; Jeff Lotzer; Mary Eberle Nucleic Acids Research 1989. doi:10.1093/nar/17.2.477
Claim · model-written summary
Peanut codon usage most closely resembled that of L. japonicus.
Arachis hypogaeae0Verbatim
e0“The codon usage pattern for Arachis hypogaea most closely resembles that of L. japonicus”
Title
RESEARCH ARTICLE - Analysis of genomic sequences from peanut (Arachis hypogaea)
B. S. Jayashree; Morag Ferguson; Daniel C. Ilut; et al. TSpace 2005
Claim · model-written summary
Relative synonymous codon usage in Polygala vulgaris was largely consistent with other Polygala species.
Verbatim
e0“a codon usage pattern largely consistent with that observed across other Polygala species”
Title
İlayda Gülmez; Ali A. Dönmez; Zübeyde Uğurlu Aydın Planta 2026. doi:10.1007/s00425-026-04971-7
Claim · model-written summary
Codon usage correlated negatively with protein length.
Arabidopsist0Verbatim
e0“there is a strong negative correlation between codon usage and protein length.”
t0“Arabidopsis”
Title
Duret, Laurent; Mouchiroud, Dominique HAL (Le Centre pour la Communication Scientifique Directe) 1999
Claim · model-written summary
The three plastomes had similar codon usage.
Pedicularise0Verbatim
e0“we sequenced and assembled chloroplast genomes of three Pedicularis species, P. chinensis, P. melampyriflora, and P. striata using high-throughput Illumina sequencing.”
e3“The three plastomes exhibited a similar codon usage pattern.”
Title
The complete chloroplast genome sequences of three Pedicularis species (Orobanchaceae)
Mingcheng Wang; Shuqiao Zhang; Lei Zhang Genetics and Molecular Biology 2024. doi:10.1590/1678-4685-gmb-2024-0010
Claim · model-written summary
Codon usage correlated with expression levels in Arabidopsis.
Arabidopsist0Not reportedDirection
Verbatim
e0“In those three species, we observed a clear correlation between codon usage and gene expression levels”
t0“Arabidopsis”
Title
Duret, Laurent; Mouchiroud, Dominique HAL (Le Centre pour la Communication Scientifique Directe) 1999
Lexical search (BM25). All words must match; if nothing does, any word. Organism names also match every spelling of the same organism. No semantic search yet.
Zea mays
Polygala