Method / resourcemodel-written summary

The two P. cinnamomi genome assemblies contain 21,111–21,402 gene models

A claim from Genomic and transcriptomic analyses of Phytophthora cinnamomi reveal complex genome architecture, expansion of pathogenicity factors, and host-dependent gene expression profiles · 2024

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The two P. cinnamomi genome assemblies contain 21,111–21,402 gene models

Taxon
avocadoPersea americanae1
Interactor
P. cinnamomiPhytophthora cinnamomie1pathogen
Outcome
gene modelse2
Value
21,111–21,402e2

Not reportedMaterialGeneCompoundOrgan / stageSecond interactorSecond interactor roleTreatmentComparatorSettingDirectionQualifier

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Persea americana
Persea americana · TaxonB.navez · CC BY-SA 3.0 · Wikimedia Commons ↗
Phytophthora cinnamomi
Phytophthora cinnamomi · InteractorKarel Černý · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“The genome of two genetically and phenotypically distinct P. cinnamomi isolates collected from avocado orchards in California were sequenced using PacBio and Illumina sequencing”

✓ located verbatim in the source · abstract, characters 323–500
e2

“Genome sizes were estimated by flow cytometry and assembled de novo to 140–141 Mb genomes with 21,111–21,402 gene models”

✓ located verbatim in the source · abstract, characters 502–622

Title

Genomic and transcriptomic analyses of Phytophthora cinnamomi reveal complex genome architecture, expansion of pathogenicity factors, and host-dependent gene expression profiles

Aidan C. Shands; Guangyuan Xu; Rodger J. Belisle; et al. Frontiers in Microbiology 2024. doi:10.3389/fmicb.2024.1341803

Other claims from this paper (7)

Record rev-21272ebadb892d58d2daa4563fa07244241fb119ddbe3c292c613f1eebd8c275 · schema claims-v0.9 · position 2 in the model’s answer