Claim · model-written summary
RNA-seq identified 3,815 differentially expressed genes in potato under ABT treatment.
- Taxon
- potato
Solanum tuberosumt0 - Treatment
- ABTe0
- Outcome
- differentially expressed genes (DEGs)e0
- Value
- 3,815e0
Not reportedMaterialGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleComparatorSettingDirectionQualifier
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
t0“potato”
e0“RNA-seq analysis identified 6,668 and 3,815 differentially expressed genes (DEGs) under SA and ABT treatments”
Title
Aie Chen; Beini Zhang; Huijie Wang; et al. BMC Plant Biology 2025. doi:10.1186/s12870-025-06975-z
Other claims from this paper (14)
- Intervention effect RNA-seq identified 6,668 differentially expressed genes in potato under SA treatment.
- Observation 1,759 DEGs showed inverse expression patterns between the SA and ABT treatments.
- Observation The DEGs were predominantly involved in phenylpropanoid biosynthesis, glutathione metabolism and plant hormone signal transduction.
- Observation The DEGs were also predominantly involved in MAPK signaling and plant-pathogen interactions.
- Intervention effect Exogenous SA activated genes associated with gibberellin, abscisic acid and brassinosteroid signaling.
- Intervention effect Exogenous SA activated genes associated with SA signaling pathways.
- Intervention effect Exogenous SA suppressed key jasmonic acid signaling genes, including JAR1 and MYC2.
- Intervention effect Multiple PR1 genes were strongly upregulated by SA.
- Intervention effect Transcription factors from the WRKY, ERF, C2H2, MYB and NAC families were strongly upregulated by SA.
- Mechanism Virus-induced gene silencing showed that NbPAL1 and NbPAL2 are essential regulators of SA biosynthesis.
- Intervention effect SA treatment strongly induced 19 glutathione S-transferases among detoxification-related enzymes.
- Intervention effect SA treatment strongly induced 30 cytochrome P450 genes among detoxification-related enzymes.
- Intervention effect Two isoforms of CYP94B3, involved in JA-Ile hydroxylation, were induced by SA.
- Intervention effect Two isoforms of CYP94B3 were repressed by ABT.