Claim · model-written summary
The black co-expression module was most correlated with lignin content.
- Taxon
- pomelo
Citrus maximat0 - Material
- black modulee0
- Outcome
- lignin contente0
Not reportedGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorSettingDirectionValueQualifier
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“we found a most correlated module (black module) to the lignin content”
t0“Pomelo (Citrus maxima)”
Title
Xiaoting Li; Hantang Huang; Hafiz Muhammad Rizwan; et al. Genes 2022. doi:10.3390/genes13050845
Other claims from this paper (8)
- Observation Lignin content in both juice sac positions increased from 157 to 212 DPA and peaked at 212 DPA.
- Observation Near-core juice sacs had higher lignin content than far-core juice sacs.
- Observation Eleven DEGs in the module were identified as hub genes for lignin biosynthesis.
- Observation PAL, HCT and 4CL2 were among the most distinct DEGs in granulated juice sacs.
- Observation C4H, C3′H and CCoAOMT1 were among the most distinct DEGs in granulated juice sacs.
- Association MYB, NAC and OFP6 expression patterns were highly correlated with lignin formation.
- Association bHLH130 expression pattern was highly correlated with lignin formation.
- Method / resource qRT-PCR expression patterns were highly concordant with RNA-seq results.