Claim · model-written summary
Hierarchical clustering placed CYP genes into four clusters with 4, 15, 21 and 13 genes.
Zea maysNot reportedMaterialGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorSettingDirectionQualifier
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“A hierarchical clustering analysis obtained four main clusters named C1 to C4 in which 4, 15, 21, and 13 CYP genes were found in each respective cluster.”
t0“maize (Zea mays L.)”
Title
Xiao-min LIU; Xian XU; Bing-hua LI; et al. Journal of Integrative Agriculture 2018. doi:10.1016/s2095-3119(18)61921-5
Other claims from this paper (12)
- Observation Tolerant HBR and sensitive HBS maize inbreds differed significantly in nicosulfuron response, with EC50 values of 763.6 and 5.9 g a.i. ha–1.
- Intervention effect Malathion pretreatment increased nicosulfuron injury in HBR.
- Intervention effect Malathion pretreatment increased nicosulfuron injury in HBS.
- Association The authors associate nicosulfuron selectivity with cytochrome P450 metabolism.
- Observation Genome analysis identified 314 full length maize CYP genes.
- Observation The maize CYP genes were classified into 2 types, 10 clans and 44 families.
- Observation The CYP71 clan contained all 168 A-type genes in 17 families.
- Observation Nine clans contained 146 non-A-type genes in 27 families.
- Observation A-type CYP proteins had the PFGXGRRXCPG heme-binding consensus.
- Observation Non-A-type CYP proteins had the FXXGPRXCXG heme-binding consensus.
- Observation Transcriptome sequencing found 53 CYP genes differentially expressed across genotype and nicosulfuron treatment comparisons.
- Method / resource RT-qPCR confirmed expression patterns of some CYP genes.