Claim · model-written summary
RT-qPCR of selected fungal and plant DEGs confirmed RNA-seq results.
- Taxon
- A. thaliana
Arabidopsis thalianae0 - Outcome
- confirm the RNA-seq resultse0
- Value
- six DEGse0
Not reportedMaterialGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorSettingDirectionQualifier
Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Verbatim
e0“six DEGs from C. higginsianum and six DEGs from A. thaliana were selected for real-time quantitative PCR (RT-qPCR) to confirm the RNA-seq results.”
Title
Yiming Zhu; Lingtao Duan; Chengqi Zhu; et al. International Journal of Molecular Sciences 2023. doi:10.3390/ijms24054376
Other claims from this paper (10)
- Observation Comparison of fungal strains found 900 DEGs at 8 hpi.
- Observation Comparison of fungal strains found 692 DEGs at 22 hpi.
- Observation Comparison of fungal strains found 496 DEGs at 40 hpi.
- Observation Comparison of fungal strains found 3159 DEGs at 60 hpi.
- Observation DEGs were mainly involved in fungal development, secondary metabolism, plant–fungal interactions and hormone signaling.
- Method / resource A regulatory network of key infection genes was identified.
- Observation THR1 showed the strongest enrichment among key genes.
- Observation Chatg8Δ strain showed reduced melanin in appressoria and colonies.
- Observation Chthr1Δ strain showed reduced melanin in appressoria and colonies.
- Observation Chthr1Δ strain lost pathogenicity.