Claim · model-written summary
Comparison of fungal strains found 692 DEGs at 22 hpi.
- Taxon
- A. thaliana
Arabidopsis thalianae1 - Outcome
- DEGse0
- Value
- 692 DEGse0
Not reportedMaterialGeneCompoundOrgan / stageInteractorInteractor roleSecond interactorSecond interactor roleTreatmentComparatorSettingDirectionQualifier
Organisms pictured · Representative pictures of the matched species, not figures from the paper.
Verbatim
e0“692 DEGs (283 upregulated and 409 down-regulated) at 22 hpi”
e1“infected leaves of A. thaliana”
Title
Yiming Zhu; Lingtao Duan; Chengqi Zhu; et al. International Journal of Molecular Sciences 2023. doi:10.3390/ijms24054376
Other claims from this paper (10)
- Observation Comparison of fungal strains found 900 DEGs at 8 hpi.
- Observation Comparison of fungal strains found 496 DEGs at 40 hpi.
- Observation Comparison of fungal strains found 3159 DEGs at 60 hpi.
- Observation DEGs were mainly involved in fungal development, secondary metabolism, plant–fungal interactions and hormone signaling.
- Method / resource A regulatory network of key infection genes was identified.
- Observation THR1 showed the strongest enrichment among key genes.
- Observation Chatg8Δ strain showed reduced melanin in appressoria and colonies.
- Observation Chthr1Δ strain showed reduced melanin in appressoria and colonies.
- Observation Chthr1Δ strain lost pathogenicity.
- Method / resource RT-qPCR of selected fungal and plant DEGs confirmed RNA-seq results.