By interacting organism › Bacteria › Pectobacteriaceae › Pectobacterium carotovorum subsp. carotovorum

Associationobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

AkLOX2/3/11 expression increased significantly under Pcc stress.

Taxon: Amorphophallus konjacAmorphophallus konjact0
Treatment: Pectobacterium carotovorum subsp. carotovorum (Pcc) stresse0
Interactor: Pectobacterium carotovorum subsp. carotovorumPectobacterium carotovorum subsp. carotovorume0pathogen
Gene: AkLOX2/3/11e0
Outcome: expression levelse0
Direction: up-regulatede0

Verbatim

e0
“Under Pectobacterium carotovorum subsp. carotovorum (Pcc) stress, the expression levels of AkLOX2/3/11 were significantly up-regulated”
✓ located verbatim in the source · abstract, characters 2015–2149

t0
“Amorphophallus konjac”
✓ located verbatim in the source · title, characters 43–64

Title

Identification of the AkLOX gene family in Amorphophallus konjac and analysis of its expression patterns under different treatments

Dandan Gao; Haoliang Shi; Ying Qi; et al. BMC Genomics 2026. doi:10.1186/s12864-026-12942-1

Other claims from this paper (10)

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Bacterial soft rot occurred only with conventional irrigation and was not detected in smart-irrigated greenhouses.

Treatment: smart-irrigatede0
Interactor: Pectobacterium carotovorum subsp. carotovorumPectobacterium carotovorum subsp. carotovorume0pathogen
Outcome: Bacterial soft rote0
Comparator: conventional irrigatione0

Not reportedTaxonDirection

Verbatim

e0
“Bacterial soft rot caused by Pectobacterium carotovorum subsp. carotovorum occurred only under conventional irrigation, whereas no soft rot or other major diseases were detected in smart-irrigated greenhouses”
✓ located verbatim in the source · abstract, characters 1313–1521

Title

Development and Evaluation of a Smart Soil Moisture-Based Irrigation System for Organic Greenhouse Production of High-Value Vegetables in Thailand

Wannaporn Thepbandit; Daniel Martinez Lacasa; Wilawan Chuaboon; et al. AgriEngineering 2026. doi:10.3390/agriengineering8050193

Other claims from this paper (5)

Method / resource Smart irrigation maintained root-zone moisture around 50–60%.
Method / resource Smart irrigation prevented daytime temperatures above 40 °C, compared with 40–45 °C peaks under conventional irrigation.
Intervention effect Smart irrigation increased crop yields 20–29% over conventional practice.
Intervention effect Smart irrigation reduced water use 41–60% relative to conventional practice.
Intervention effect Smart irrigation increased crop income 20–56%, depending on crop.

Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The exudate showed limited antibacterial efficacy against Pectobacterium carotovorum subsp. carotovorum, with MIC above 1000 μg/mL.

Taxon: Salvia karwinskiiSalvia karwinskiit0
Interactor: Pectobacterium carotovorum subsp. carotovorumPectobacterium carotovorum subsp. carotovorume3pathogen
Outcome: MICe3
Value: > 1000 μg/mLe3
Qualifier: limited efficacye3

Verbatim

e3
“limited efficacy against Pectobacterium carotovorum subsp. carotovorum (MIC > 1000 μg/mL)”
✓ located verbatim in the source · abstract, characters 734–823

t0
“Salvia karwinskii Benth. exudate”
✓ located verbatim in the source · title, characters 50–82

Title

Phytochemical insights and biological activity of Salvia karwinskii Benth. exudate against phytopathogens and pests

Devi P; Lanteri A P; Minuto A; et al. CINECA IRIS Institutial Research Information System (University of Genoa) 2025

Other claims from this paper (12)

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Potato was mostly affected by the bacterial pathogens inoculated.

Taxon: potatoSolanum tuberosume1
Treatment: inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorumt0
Interactor: Pseudomonas syringae pv. syringaePseudomonas syringae pv. syringaet0pathogen
Second interactor: Pectobacterium Carotovorum subsp. CarotovorumPectobacterium carotovorum subsp. carotovorumt0pathogen
Outcome: mostly affectede1
Direction: mostly affectede1

Not reportedComparator

Verbatim

t0
“inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorum”
✓ located verbatim in the source · title, characters 86–185

e1
“The genus Solanum, potato and tomato, was mostly affected by the pathogens followed by Capsicum, chilli pepper, and another Solanum plant, eggplant, was the least affected”
✓ located verbatim in the source · abstract, characters 768–939

Title

Comparison of effects on chlorophyll content and growth between four Solanaceae crops inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorum

Innocentia Moloto; Hosana Dumisani Mkoyi; Fikile Nelly Makhubu; et al. Discover Plants. 2025. doi:10.1007/s44372-025-00437-4

Other claims from this paper (5)

Intervention effect Tomato was mostly affected by the bacterial pathogens inoculated.
Intervention effect Chilli pepper was affected by the bacterial pathogens inoculated, followed the mostly affected Solanum crops.
Intervention effect Eggplant was the least affected by the bacterial pathogens inoculated.
Association A few correlation pairings were found between Solanum crops, with some exclusion of chilli pepper.
Association No clear correlation signature was established across the four Solanaceae crops.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Tomato was mostly affected by the bacterial pathogens inoculated.

Taxon: tomatoSolanum lycopersicume1
Treatment: inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorumt0
Interactor: Pseudomonas syringae pv. syringaePseudomonas syringae pv. syringaet0pathogen
Second interactor: Pectobacterium Carotovorum subsp. CarotovorumPectobacterium carotovorum subsp. carotovorumt0pathogen
Outcome: mostly affectede1
Direction: mostly affectede1

Not reportedComparator

Verbatim

t0
“inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorum”
✓ located verbatim in the source · title, characters 86–185

e1
“The genus Solanum, potato and tomato, was mostly affected by the pathogens followed by Capsicum, chilli pepper, and another Solanum plant, eggplant, was the least affected”
✓ located verbatim in the source · abstract, characters 768–939

Title

Comparison of effects on chlorophyll content and growth between four Solanaceae crops inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorum

Innocentia Moloto; Hosana Dumisani Mkoyi; Fikile Nelly Makhubu; et al. Discover Plants. 2025. doi:10.1007/s44372-025-00437-4

Other claims from this paper (5)

Intervention effect Potato was mostly affected by the bacterial pathogens inoculated.
Intervention effect Chilli pepper was affected by the bacterial pathogens inoculated, followed the mostly affected Solanum crops.
Intervention effect Eggplant was the least affected by the bacterial pathogens inoculated.
Association A few correlation pairings were found between Solanum crops, with some exclusion of chilli pepper.
Association No clear correlation signature was established across the four Solanaceae crops.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Chilli pepper was affected by the bacterial pathogens inoculated, followed the mostly affected Solanum crops.

Taxon: chilli peppere1
Treatment: inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorumt0
Interactor: Pseudomonas syringae pv. syringaePseudomonas syringae pv. syringaet0pathogen
Second interactor: Pectobacterium Carotovorum subsp. CarotovorumPectobacterium carotovorum subsp. carotovorumt0pathogen
Outcome: affected by the pathogense1
Qualifier: followed bye1

Not reportedComparatorDirection

Verbatim

t0
“inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorum”
✓ located verbatim in the source · title, characters 86–185

e1
“The genus Solanum, potato and tomato, was mostly affected by the pathogens followed by Capsicum, chilli pepper, and another Solanum plant, eggplant, was the least affected”
✓ located verbatim in the source · abstract, characters 768–939

Title

Comparison of effects on chlorophyll content and growth between four Solanaceae crops inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorum

Innocentia Moloto; Hosana Dumisani Mkoyi; Fikile Nelly Makhubu; et al. Discover Plants. 2025. doi:10.1007/s44372-025-00437-4

Other claims from this paper (5)

Intervention effect Potato was mostly affected by the bacterial pathogens inoculated.
Intervention effect Tomato was mostly affected by the bacterial pathogens inoculated.
Intervention effect Eggplant was the least affected by the bacterial pathogens inoculated.
Association A few correlation pairings were found between Solanum crops, with some exclusion of chilli pepper.
Association No clear correlation signature was established across the four Solanaceae crops.

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Eggplant was the least affected by the bacterial pathogens inoculated.

Taxon: eggplantSolanum melongenae1
Treatment: inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorumt0
Interactor: Pseudomonas syringae pv. syringaePseudomonas syringae pv. syringaet0pathogen
Second interactor: Pectobacterium Carotovorum subsp. CarotovorumPectobacterium carotovorum subsp. carotovorumt0pathogen
Outcome: least affectede1
Direction: least affectede1

Not reportedComparator

Verbatim

t0
“inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorum”
✓ located verbatim in the source · title, characters 86–185

e1
“The genus Solanum, potato and tomato, was mostly affected by the pathogens followed by Capsicum, chilli pepper, and another Solanum plant, eggplant, was the least affected”
✓ located verbatim in the source · abstract, characters 768–939

Title

Comparison of effects on chlorophyll content and growth between four Solanaceae crops inoculated with Pseudomonas syringae pv. syringae and Pectobacterium Carotovorum subsp. Carotovorum

Innocentia Moloto; Hosana Dumisani Mkoyi; Fikile Nelly Makhubu; et al. Discover Plants. 2025. doi:10.1007/s44372-025-00437-4

Other claims from this paper (5)

Intervention effect Potato was mostly affected by the bacterial pathogens inoculated.
Intervention effect Tomato was mostly affected by the bacterial pathogens inoculated.
Intervention effect Chilli pepper was affected by the bacterial pathogens inoculated, followed the mostly affected Solanum crops.
Association A few correlation pairings were found between Solanum crops, with some exclusion of chilli pepper.
Association No clear correlation signature was established across the four Solanaceae crops.

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

The AHL-deficient mutant lost antagonism against Erwinia carotovora subsp. carotovora

Taxon: Burkholderia vietnamiensisBurkholderia vietnamiensise2
Treatment: AHL-deficient mutant (ΔCBMB40)e7
Interactor: Erwinia carotovora subsp. carotovoraPectobacterium carotovorum subsp. carotovorume3pathogen
Outcome: antagonism against Erwinia carotovora subsp. carotovorae3
Direction: losse3

Not reportedComparator

Verbatim

e2
“we investigated the QS systems of Burkholderia vietnamiensis strains”
✓ located verbatim in the source · abstract, characters 616–684

e7
“A random transposon mutagenesis approach was employed to generate an AHL-deficient mutant (ΔCBMB40)”
✓ located verbatim in the source · abstract, characters 1309–1408

e3
“loss of antagonism against Erwinia carotovora subsp. carotovora”
✓ located verbatim in the source · abstract, characters 1485–1548

Title

The plant growth-promoting Burkholderia vietnamiensis produces acyl-homoserine lactones and modulates the quorum-sensing signaling in the rhizosphere

Selvaraj Poonguzhali; Kiyoon Kim; Munusamy Madhaiyan; et al. Frontiers in Microbiology 2025. doi:10.3389/fmicb.2025.1638793

Other claims from this paper (12)

Observation Two functional QS circuits, CepI/R and BviI/R, synthesize distinct AHL molecules, with C10-HSL dominant
Observation Both synthases in CBMB40 contributed to production of N-hexanoyl (C6) and N-octanoyl (C8) homoserine lactones
Observation The bviI synthase contributed to production of C10-HSL and N-dodecanoyl (C12) homoserine lactones
Observation AHLs produced by CBMB40 could be detected in plant tissues
Observation AHLs served as interpopulation signaling molecules within the rhizosphere
Intervention effect The AHL-deficient mutant exhibited an extended log phase compared with the wild type
Intervention effect The AHL-deficient mutant showed reduced protease activity
Intervention effect The AHL-deficient mutant showed diminished activity against multiple fungal pathogens
Intervention effect Adding AHL extracts from the wild-type strain restored antagonistic activity in the mutant
Mechanism In potato tuber assays, AHL-mediated QS was essential for the biocontrol potential of CBMB40
Mechanism In pot culture in red pepper, AHL-mediated QS was essential for the biocontrol potential of CBMB40
Recommendation The authors recommend CBMB40 as a potential sustainable biocontrol agent in agriculture

Observationobservedoriginal resultmeasured

Claim · model-written summary

In the tritrophic interaction, 1-Hexanol, 2-ethyl showed the highest peak area (13.89%) with retention time 4.89 min.

Taxon: Daucus carotaDaucus carotat0
Interactor: Pectobacterium carotovorum subsp. carotovorumPectobacterium carotovorum subsp. carotovorume1pathogen
Second interactor: Pichia kudriavzeviiPichia kudriavzeviie1biocontrol_agent
Compound: 1-Hexanol, 2-ethyle1
Outcome: peak areae1
Value: 13.89%e1
Qualifier: retention time of 4.89 mine1

Verbatim

t0
“soft rot pathogen of carrot (Daucus carota)”
✓ located verbatim in the source · title, characters 94–137

e1
“The tritrophic interaction of soft rot pathogen Pectobacterium carotovorum subsp. carotovorum and yeast isolate YKP 12 Pichia kudriavzevii was analyzed through GCMS analysis and the metabolite 1-Hexanol, 2-ethyl showed highest peak area of 13.89% with the retention time of 4.89 min”
✓ located verbatim in the source · abstract, characters 685–967

Title

GC-MS analysis of metabolites in tritrophic interaction of yeast (Pichia Kudriavzevii)against soft rot pathogen of carrot (Daucus carota)

S LAVANYA; P MUTHULAKSHMI; I JOHNSON The Indian Journal of Agricultural Sciences 2025. doi:10.56093/ijas.v95i1.145394

Other claims from this paper (1)

Observation The compound 1, 2-Benzenedicarboxylic acid monoester had both antibacterial and antifungal activity.

Observationobservedreview summarynegativebasis n/a

Claim · model-written summary

Pcc affects a wide range of cultivated plants during growth and fruit storage.

Taxon: cultivated plantse0
Interactor: Pectobacterium carotovorum subsp. carotovorumPectobacterium carotovorum subsp. carotovorume1pathogen
Outcome: affects a wide range of cultivated plantse0

Verbatim

e0
“it affects a wide range of cultivated plants: vegetables, ornamental and medicinal crops, both during vegetation and during the storage of fruits.”
✓ located verbatim in the source · abstract, characters 246–392

e1
“Pectobacterium carotovorum subsp. carotovorum (Pcc).”
✓ located verbatim in the source · abstract, characters 130–182

Title

The Causative Agent of Soft Rot in Plants, the Phytopathogenic Bacterium Pectobacterium carotovorum subsp. carotovorum: A Brief Description and an Overview of Methods to Control It

Alla I. Perfileva; Elena I. Strekalovskaya; Nadezhda V. Klushina; et al. Agronomy 2025. doi:10.3390/agronomy15071578

Other claims from this paper (4)

Pectobacterium carotovorum subsp. carotovorum 762 claims

762 claims