Paper · 2010 · Cytogenetic and Genome Research

Chiasma Frequency Is Region Specific and Chromosome Conformation Dependent in a Rye Chromosome Added to Wheat

T. Naranjo; N.T. Valenzuela; E. Perera

7
claims
21
verbatim quotes
23
citations
2
research areas
—
Not open access

Abstract

In many plant species synapsis starts at, or close to, the chromosome ends and this has been considered to be related to the distal location of chiasmata. In this regard we have studied the meiotic behavior of rye chromosome pair 5R in a wheat background using fluorescence in situ hybridization. The use of different DNA probes allowed the identification of the 2 rye homologues, their centromeres and subtelomeric heterochromatic chromomeres, and the telomeres of all chromosomes in prophase I and metaphase I. Three types of plants were analyzed: homozygotes for the standard chromosome 5R, homozygotes for a deficient chromosome 5R (del5R) with only the proximal 30% of its long arm (del5RL) and heterozygotes. Synapsis of the deficient chromosome arm pair del5RL was completed in most meiocytes at pachytene but the number of chiasmata formed was much lower than in the intact 5RL arm. Deletion facilitated the migration of the telomere of the accompanying chromosome arm 5RS during bouquet organization. This was followed by an increase of synapsis and chiasma frequency in this arm with regard to its counterpart of the intact chromosome. Results demonstrate that crossover formation depends on the DNA sequence or the chromatin organization of each chromosome region and that homologous alignment, synapsis and chiasma formation may be conditioned by chromosome conformation.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Synapsis of the deficient rye chromosome arm was completed in most pachytene meiocytes.

Material
del5RLe0
Organ / stage
pachytenee0
Outcome
Synapsis of the deficient chromosome arm pair del5RL was completede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Secale cereale
Secale cereale · TaxonLSDSL · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Synapsis of the deficient chromosome arm pair del5RL was completed in most meiocytes at pachytene”

✓ located verbatim in the source · abstract, characters 715–812 · show in text ↑
t0

“Rye Chromosome Added to Wheat”

✓ located verbatim in the source · title, characters 80–109 · show in text ↑
e1

“Three types of plants were analyzed: homozygotes for the standard chromosome 5R, homozygotes for a deficient chromosome 5R (del5R) with only the proximal 30% of its long arm (del5RL) and heterozygotes.”

✓ located verbatim in the source · abstract, characters 513–714 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The deficient del5RL arm formed far fewer chiasmata than intact 5RL.

Material
del5RLe1
Outcome
number of chiasmata formede0
Direction
much lowere0
Comparator
intact 5RL arme0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Secale cereale
Secale cereale · TaxonLSDSL · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the number of chiasmata formed was much lower than in the intact 5RL arm.”

✓ located verbatim in the source · abstract, characters 817–890 · show in text ↑
t0

“Rye Chromosome Added to Wheat”

✓ located verbatim in the source · title, characters 80–109 · show in text ↑
e1

“Three types of plants were analyzed: homozygotes for the standard chromosome 5R, homozygotes for a deficient chromosome 5R (del5R) with only the proximal 30% of its long arm (del5RL) and heterozygotes.”

✓ located verbatim in the source · abstract, characters 513–714 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Deletion facilitated migration of the accompanying 5RS telomere during bouquet organization.

Treatment
Deletione0
Outcome
migration of the telomere of the accompanying chromosome arm 5RSe0
Direction
facilitatede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Secale cereale
Secale cereale · TaxonLSDSL · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Deletion facilitated the migration of the telomere of the accompanying chromosome arm 5RS during bouquet organization.”

✓ located verbatim in the source · abstract, characters 891–1009 · show in text ↑
t0

“Rye Chromosome Added to Wheat”

✓ located verbatim in the source · title, characters 80–109 · show in text ↑
e1

“Three types of plants were analyzed: homozygotes for the standard chromosome 5R, homozygotes for a deficient chromosome 5R (del5R) with only the proximal 30% of its long arm (del5RL) and heterozygotes.”

✓ located verbatim in the source · abstract, characters 513–714 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Deletion increased synapsis in chromosome arm 5RS relative to its intact counterpart.

Treatment
deficient chromosome 5Re1
Outcome
synapsise0
Direction
increasee0
Comparator
its counterpart of the intact chromosomee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Secale cereale
Secale cereale · TaxonLSDSL · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This was followed by an increase of synapsis and chiasma frequency in this arm with regard to its counterpart of the intact chromosome.”

✓ located verbatim in the source · abstract, characters 1010–1145 · show in text ↑
t0

“Rye Chromosome Added to Wheat”

✓ located verbatim in the source · title, characters 80–109 · show in text ↑
e1

“Three types of plants were analyzed: homozygotes for the standard chromosome 5R, homozygotes for a deficient chromosome 5R (del5R) with only the proximal 30% of its long arm (del5RL) and heterozygotes.”

✓ located verbatim in the source · abstract, characters 513–714 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Deletion increased chiasma frequency in chromosome arm 5RS relative to its intact counterpart.

Treatment
deficient chromosome 5Re1
Outcome
chiasma frequencye0
Direction
increasee0
Comparator
its counterpart of the intact chromosomee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Secale cereale
Secale cereale · TaxonLSDSL · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“This was followed by an increase of synapsis and chiasma frequency in this arm with regard to its counterpart of the intact chromosome.”

✓ located verbatim in the source · abstract, characters 1010–1145 · show in text ↑
t0

“Rye Chromosome Added to Wheat”

✓ located verbatim in the source · title, characters 80–109 · show in text ↑
e1

“Three types of plants were analyzed: homozygotes for the standard chromosome 5R, homozygotes for a deficient chromosome 5R (del5R) with only the proximal 30% of its long arm (del5RL) and heterozygotes.”

✓ located verbatim in the source · abstract, characters 513–714 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Crossover formation depends on regional DNA sequence or chromatin organization.

Outcome
crossover formatione0
Qualifier
DNA sequence or the chromatin organization of each chromosome regione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Secale cereale
Secale cereale · TaxonLSDSL · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“crossover formation depends on the DNA sequence or the chromatin organization of each chromosome region”

✓ located verbatim in the source · abstract, characters 1171–1274 · show in text ↑
t0

“Rye Chromosome Added to Wheat”

✓ located verbatim in the source · title, characters 80–109 · show in text ↑
e1

“Three types of plants were analyzed: homozygotes for the standard chromosome 5R, homozygotes for a deficient chromosome 5R (del5R) with only the proximal 30% of its long arm (del5RL) and heterozygotes.”

✓ located verbatim in the source · abstract, characters 513–714 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Chromosome conformation may condition homologous alignment, synapsis and chiasma formation.

Outcome
homologous alignment, synapsis and chiasma formatione0
Qualifier
chromosome conformatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Secale cereale
Secale cereale · TaxonLSDSL · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“homologous alignment, synapsis and chiasma formation may be conditioned by chromosome conformation.”

✓ located verbatim in the source · abstract, characters 1284–1383 · show in text ↑
t0

“Rye Chromosome Added to Wheat”

✓ located verbatim in the source · title, characters 80–109 · show in text ↑
e1

“Three types of plants were analyzed: homozygotes for the standard chromosome 5R, homozygotes for a deficient chromosome 5R (del5R) with only the proximal 30% of its long arm (del5RL) and heterozygotes.”

✓ located verbatim in the source · abstract, characters 513–714 · show in text ↑