Paper · 2009 · PLoS ONE

Repression of FLOWERING LOCUS T Chromatin by Functionally Redundant Histone H3 Lysine 4 Demethylases in Arabidopsis

Ju-Hee Jeong; Hae-Ryong Song; Jong-Hyun Ko; et al.

7
claims
10
verbatim quotes
177
citations
2
research areas
✓
Open access · cc-by

Abstract

FLOWERING LOCUS T (FT) plays a key role as a mobile floral induction signal that initiates the floral transition. Therefore, precise control of FT expression is critical for the reproductive success of flowering plants. Coexistence of bivalent histone H3 lysine 27 trimethylation (H3K27me3) and H3K4me3 marks at the FT locus and the role of H3K27me3 as a strong FT repression mechanism in Arabidopsis have been reported. However, the role of an active mark, H3K4me3, in FT regulation has not been addressed, nor have the components affecting this mark been identified. Mutations in Arabidopsis thaliana Jumonji4 (AtJmj4) and EARLY FLOWERING6 (ELF6), two Arabidopsis genes encoding Jumonji (Jmj) family proteins, caused FT-dependent, additive early flowering correlated with increased expression of FT mRNA and increased H3K4me3 levels within FT chromatin. Purified recombinant AtJmj4 protein possesses specific demethylase activity for mono-, di-, and trimethylated H3K4. Tagged AtJmj4 and ELF6 proteins associate directly with the FT transcription initiation region, a region where the H3K4me3 levels were increased most significantly in the mutants. Thus, our study demonstrates the roles of AtJmj4 and ELF6 as H3K4 demethylases directly repressing FT chromatin and preventing precocious flowering in Arabidopsis.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 7

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

AtJmj4 and ELF6 mutations caused additive FT dependent early flowering.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
Mutations in Arabidopsis thaliana Jumonji4 (AtJmj4) and EARLY FLOWERING6 (ELF6)e0
Gene
AtJmj4e0
Outcome
early floweringe0
Direction
earlye0
Qualifier
FT-dependent, additivee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Mutations in Arabidopsis thaliana Jumonji4 (AtJmj4) and EARLY FLOWERING6 (ELF6), two Arabidopsis genes encoding Jumonji (Jmj) family proteins, caused FT-dependent, additive early flowering correlated with increased expression of FT mRNA and increased H3K4me3 levels within FT chromatin.”

✓ located verbatim in the source · abstract, characters 569–855 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Mutations in AtJmj4 and ELF6 were associated with increased FT mRNA expression.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
Mutations in Arabidopsis thaliana Jumonji4 (AtJmj4) and EARLY FLOWERING6 (ELF6)e0
Gene
FTe0
Outcome
expression of FT mRNAe0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Mutations in Arabidopsis thaliana Jumonji4 (AtJmj4) and EARLY FLOWERING6 (ELF6), two Arabidopsis genes encoding Jumonji (Jmj) family proteins, caused FT-dependent, additive early flowering correlated with increased expression of FT mRNA and increased H3K4me3 levels within FT chromatin.”

✓ located verbatim in the source · abstract, characters 569–855 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Mutations in AtJmj4 and ELF6 were associated with increased H3K4me3 within FT chromatin.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
Mutations in Arabidopsis thaliana Jumonji4 (AtJmj4) and EARLY FLOWERING6 (ELF6)e0
Gene
FTe0
Outcome
H3K4me3 levels within FT chromatine0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Mutations in Arabidopsis thaliana Jumonji4 (AtJmj4) and EARLY FLOWERING6 (ELF6), two Arabidopsis genes encoding Jumonji (Jmj) family proteins, caused FT-dependent, additive early flowering correlated with increased expression of FT mRNA and increased H3K4me3 levels within FT chromatin.”

✓ located verbatim in the source · abstract, characters 569–855 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Purified AtJmj4 demethylated mono, di and trimethylated H3K4.

Taxon
ArabidopsisArabidopsist0
Gene
AtJmj4 proteine0
Outcome
specific demethylase activity for mono-, di-, and trimethylated H3K4e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Purified recombinant AtJmj4 protein possesses specific demethylase activity for mono-, di-, and trimethylated H3K4.”

✓ located verbatim in the source · abstract, characters 856–971 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 104–115 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

AtJmj4 and ELF6 proteins associated directly with the FT transcription initiation region.

Taxon
ArabidopsisArabidopsist0
Gene
AtJmj4 and ELF6 proteinse0
Outcome
associate directly with the FT transcription initiation regione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Tagged AtJmj4 and ELF6 proteins associate directly with the FT transcription initiation region, a region where the H3K4me3 levels were increased most significantly in the mutants.”

✓ located verbatim in the source · abstract, characters 972–1151 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 104–115 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

The FT initiation region showed the greatest increase in H3K4me3 in mutants.

Taxon
ArabidopsisArabidopsist0
Material
mutantse0
Gene
FTe0
Outcome
H3K4me3 levelse0
Direction
increased most significantlye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Tagged AtJmj4 and ELF6 proteins associate directly with the FT transcription initiation region, a region where the H3K4me3 levels were increased most significantly in the mutants.”

✓ located verbatim in the source · abstract, characters 972–1151 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 104–115 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors conclude that AtJmj4 and ELF6 directly repress FT chromatin and prevent premature flowering.

Taxon
ArabidopsisArabidopsise0
Gene
AtJmj4 and ELF6e0
Outcome
preventing precocious floweringe0
Qualifier
directly repressing FT chromatine0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Thus, our study demonstrates the roles of AtJmj4 and ELF6 as H3K4 demethylases directly repressing FT chromatin and preventing precocious flowering in Arabidopsis.”

✓ located verbatim in the source · abstract, characters 1152–1315 · show in text ↑

loss of function · phenology · Arabidopsis thaliana (thale cress)Positive and negative results

15 papers: 6 positive, 9 negative or no effect

5 papers in the same direction as this paper · 9 in the opposite direction

  1. no effect
  2. negative
  3. negative

11 papers more in this group

See all 15 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.