Paper · 2006 · Molecular Plant-Microbe Interactions

Effects of the Tomato Pathogen Fusarium oxysporum f. sp. radicis-lycopersici and of the Biocontrol Bacterium Pseudomonas fluorescens WCS365 on the Composition of Organic Acids and Sugars in Tomato Root Exudate

Faina Kamilova; Lev V. Kravchenko; Alexander I. Shaposhnikov; et al.

12
claims
22
verbatim quotes
158
citations
2
research areas
✓
Open access · cc-by-sa

Abstract

The effects of the pathogenic fungus Fusarium oxysporum f. sp. radicis-lycopersici and of the bacterial biocontrol strain Pseudomonas fluorescens WCS365, and of both microbes, on the amounts and composition of root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system were studied. Conditions were selected under which introduction of F. oxysporum f. sp. radicis-lycopersici caused severe foot and root rot, whereas inoculation of the seed with P. fluorescens WCS365 decreased the percentage of diseased plants from 96 to 7%. This is a much better disease control level than was observed in potting soil. Analysis of root exudate revealed that the presence of F. oxysporum f. sp. radicis-lycopersici did not alter the total amount of organic acids, but that the amount of citric acid decreased and that of succinic acid increased compared with the nontreated control. In contrast, in the presence of the P. fluorescens biocontrol strain WCS365, the total amount of organic acid increased, mainly due to a strong increase of the amount of citric acid, whereas the amount of succinic acid decreased dramatically. Under biocontrol conditions, when both microbes are present, the content of succinic acid decreased and the level of citric acid was similar to that in the nontreated control. The amount of sugar was approximately half that of the control sample when either one of the microbes was present alone or when both were present. Analysis of the interactions between the two microbes grown together in sterile tomato root exudate showed that WCS365 inhibited multiplication of F. oxysporum f. sp. radicis-lycopersici, whereas the fungus did not affect the number of CFU of the bacterium.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by-sa. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 12

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

The presence of F. oxysporum f. sp. radicis-lycopersici did not alter the total amount of organic acids in tomato root exudate.

Treatment
presence of F. oxysporum f. sp. radicis-lycopersicie2
Interactor
F. oxysporum f. sp. radicis-lycopersiciFusarium oxysporum f. sp. radicis-lycopersicie2pathogen
Outcome
total amount of organic acidse2
Direction
did not altere2
Comparator
nontreated controle2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum f. sp. radicis-lycopersici
Fusarium oxysporum f. sp. radicis-lycopersici · Interactor · picture of its genus (no picture of exactly this name)Public domain · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e2

“the presence of F. oxysporum f. sp. radicis-lycopersici did not alter the total amount of organic acids, but that the amount of citric acid decreased and that of succinic acid increased compared with the nontreated control”

✓ located verbatim in the source · abstract, characters 677–899 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

F. oxysporum f. sp. radicis-lycopersici decreased the amount of citric acid in tomato root exudate compared with the nontreated control.

Treatment
presence of F. oxysporum f. sp. radicis-lycopersicie2
Interactor
F. oxysporum f. sp. radicis-lycopersiciFusarium oxysporum f. sp. radicis-lycopersicie2pathogen
Outcome
amount of citric acide2
Direction
decreasede2
Comparator
nontreated controle2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum f. sp. radicis-lycopersici
Fusarium oxysporum f. sp. radicis-lycopersici · Interactor · picture of its genus (no picture of exactly this name)Public domain · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e2

“the presence of F. oxysporum f. sp. radicis-lycopersici did not alter the total amount of organic acids, but that the amount of citric acid decreased and that of succinic acid increased compared with the nontreated control”

✓ located verbatim in the source · abstract, characters 677–899 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

F. oxysporum f. sp. radicis-lycopersici increased the amount of succinic acid in tomato root exudate compared with the nontreated control.

Treatment
presence of F. oxysporum f. sp. radicis-lycopersicie2
Interactor
F. oxysporum f. sp. radicis-lycopersiciFusarium oxysporum f. sp. radicis-lycopersicie2pathogen
Outcome
succinic acide2
Direction
increasede2
Comparator
nontreated controle2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum f. sp. radicis-lycopersici
Fusarium oxysporum f. sp. radicis-lycopersici · Interactor · picture of its genus (no picture of exactly this name)Public domain · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e2

“the presence of F. oxysporum f. sp. radicis-lycopersici did not alter the total amount of organic acids, but that the amount of citric acid decreased and that of succinic acid increased compared with the nontreated control”

✓ located verbatim in the source · abstract, characters 677–899 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

P. fluorescens WCS365 increased the total amount of organic acid in tomato root exudate.

Treatment
P. fluorescens biocontrol strain WCS365e3
Interactor
P. fluorescens biocontrol strain WCS365Pseudomonas fluorescense3biocontrol_agent
Outcome
total amount of organic acide3
Direction
increasede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e3

“in the presence of the P. fluorescens biocontrol strain WCS365, the total amount of organic acid increased, mainly due to a strong increase of the amount of citric acid, whereas the amount of succinic acid decreased dramatically”

✓ located verbatim in the source · abstract, characters 914–1142 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

P. fluorescens WCS365 caused a strong increase in the amount of citric acid in tomato root exudate.

Treatment
P. fluorescens biocontrol strain WCS365e3
Interactor
P. fluorescens biocontrol strain WCS365Pseudomonas fluorescense3biocontrol_agent
Outcome
amount of citric acide3
Direction
strong increasee3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e3

“in the presence of the P. fluorescens biocontrol strain WCS365, the total amount of organic acid increased, mainly due to a strong increase of the amount of citric acid, whereas the amount of succinic acid decreased dramatically”

✓ located verbatim in the source · abstract, characters 914–1142 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

P. fluorescens WCS365 decreased the amount of succinic acid dramatically in tomato root exudate.

Treatment
P. fluorescens biocontrol strain WCS365e3
Interactor
P. fluorescens biocontrol strain WCS365Pseudomonas fluorescense3biocontrol_agent
Outcome
amount of succinic acide3
Direction
decreased dramaticallye3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e3

“in the presence of the P. fluorescens biocontrol strain WCS365, the total amount of organic acid increased, mainly due to a strong increase of the amount of citric acid, whereas the amount of succinic acid decreased dramatically”

✓ located verbatim in the source · abstract, characters 914–1142 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

With both microbes present, the succinic acid content of tomato root exudate decreased.

Treatment
when both microbes are presente4
Outcome
content of succinic acide4
Direction
decreasede4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e4

“Under biocontrol conditions, when both microbes are present, the content of succinic acid decreased and the level of citric acid was similar to that in the nontreated control”

✓ located verbatim in the source · abstract, characters 1144–1318 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

With both microbes present, the citric acid level of tomato root exudate was similar to the nontreated control.

Treatment
when both microbes are presente4
Outcome
level of citric acide4
Direction
similare4
Comparator
nontreated controle4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e4

“Under biocontrol conditions, when both microbes are present, the content of succinic acid decreased and the level of citric acid was similar to that in the nontreated control”

✓ located verbatim in the source · abstract, characters 1144–1318 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Sugar amount in tomato root exudate was about half that of the control when either microbe was present alone or both were present.

Treatment
when either one of the microbes was present alonee5
Outcome
amount of sugare5
Direction
approximately halfe5
Comparator
the control samplee5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e5

“The amount of sugar was approximately half that of the control sample when either one of the microbes was present alone or when both were present”

✓ located verbatim in the source · abstract, characters 1320–1465 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

P. fluorescens WCS365 inhibited multiplication of F. oxysporum f. sp. radicis-lycopersici in sterile tomato root exudate.

Treatment
WCS365e6
Interactor
F. oxysporum f. sp. radicis-lycopersiciFusarium oxysporum f. sp. radicis-lycopersicie6pathogen
Second interactor
WCS365e6biocontrol_agent
Outcome
multiplication of F. oxysporum f. sp. radicis-lycopersicie6
Direction
inhibitede6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Fusarium oxysporum f. sp. radicis-lycopersici
Fusarium oxysporum f. sp. radicis-lycopersici · Interactor · picture of its genus (no picture of exactly this name)Public domain · Wikimedia Commons ↗

Verbatim

e6

“Analysis of the interactions between the two microbes grown together in sterile tomato root exudate showed that WCS365 inhibited multiplication of F. oxysporum f. sp. radicis-lycopersici, whereas the fungus did not affect the number of CFU of the bacterium”

✓ located verbatim in the source · abstract, characters 1467–1723 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

F. oxysporum f. sp. radicis-lycopersici did not affect the number of CFU of WCS365 in sterile tomato root exudate.

Treatment
the funguse6
Interactor
WCS365e6biocontrol_agent
Outcome
number of CFU of the bacteriume6
Direction
did not affecte6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e6

“Analysis of the interactions between the two microbes grown together in sterile tomato root exudate showed that WCS365 inhibited multiplication of F. oxysporum f. sp. radicis-lycopersici, whereas the fungus did not affect the number of CFU of the bacterium”

✓ located verbatim in the source · abstract, characters 1467–1723 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculating tomato seed with P. fluorescens WCS365 decreased the percentage of diseased plants from 96% to 7%.

Treatment
inoculation of the seed with P. fluorescens WCS365e7
Interactor
P. fluorescens WCS365Pseudomonas fluorescense7biocontrol_agent
Outcome
percentage of diseased plantse7
Direction
decreasede7
Value
from 96 to 7%e7

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“root exudate components of tomato plants grown in a gnotobiotic stonewool substrate system”

✓ located verbatim in the source · abstract, characters 210–300 · show in text ↑
e7

“inoculation of the seed with P. fluorescens WCS365 decreased the percentage of diseased plants from 96 to 7%”

✓ located verbatim in the source · abstract, characters 449–557 · show in text ↑

inoculation · molecular: metabolites · Solanum lycopersicum (tomato)Positive and negative results

44 papers: 36 positive, 8 negative or no effect

7 papers in the same direction as this paper · 36 in the opposite direction

  1. positive
  2. positive
  3. positive

40 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.