Paper · 2009 · PLANT PHYSIOLOGY

Subcellular Localization and Functional Analysis of the Arabidopsis GTPase RabE

Elena Bray Speth; Lori Imboden; Paula Hauck; et al.

5
claims
9
verbatim quotes
127
citations
3
research areas
✓
Open access · cc-by

Abstract

Membrane trafficking plays a fundamental role in eukaryotic cell biology. Of the numerous known or predicted protein components of the plant cell trafficking system, only a relatively small subset have been characterized with respect to their biological roles in plant growth, development, and response to stresses. In this study, we investigated the subcellular localization and function of an Arabidopsis (Arabidopsis thaliana) small GTPase belonging to the RabE family. RabE proteins are phylogenetically related to well-characterized regulators of polarized vesicle transport from the Golgi apparatus to the plasma membrane in animal and yeast cells. The RabE family of GTPases has also been proposed to be a putative host target of AvrPto, an effector protein produced by the plant pathogen Pseudomonas syringae, based on yeast two-hybrid analysis. We generated transgenic Arabidopsis plants that constitutively expressed one of the five RabE proteins (RabE1d) fused to green fluorescent protein (GFP). GFP-RabE1d and endogenous RabE proteins were found to be associated with the Golgi apparatus and the plasma membrane in Arabidopsis leaf cells. RabE down-regulation, due to cosuppression in transgenic plants, resulted in drastically altered leaf morphology and reduced plant size, providing experimental evidence for an important role of RabE GTPases in regulating plant growth. RabE down-regulation did not affect plant susceptibility to pathogenic P. syringae bacteria; conversely, expression of the constitutively active RabE1d-Q74L enhanced plant defenses, conferring resistance to P. syringae infection.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 5

Observationobservedoriginal resultmeasured

Claim · model-written summary

GFP-RabE1d and endogenous RabE proteins localized to Golgi and plasma membranes in Arabidopsis leaf cells.

Taxon
ArabidopsisArabidopsise0
Organ / stage
leaf cellse0
Gene
GFP-RabE1d and endogenous RabE proteinse0
Outcome
associated with the Golgi apparatus and the plasma membranee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“GFP-RabE1d and endogenous RabE proteins were found to be associated with the Golgi apparatus and the plasma membrane in Arabidopsis leaf cells”

✓ located verbatim in the source · abstract, characters 1008–1150 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

RabE down-regulation drastically altered Arabidopsis leaf morphology.

Taxon
ArabidopsisArabidopsise1
Treatment
RabE down-regulatione0
Gene
RabEe0
Outcome
leaf morphologye0
Direction
alterede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis leaf cells”

✓ located verbatim in the source · abstract, characters 1128–1150 · show in text ↑
e0

“RabE down-regulation, due to cosuppression in transgenic plants, resulted in drastically altered leaf morphology”

✓ located verbatim in the source · abstract, characters 1152–1264 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

RabE down-regulation reduced Arabidopsis plant size.

Taxon
ArabidopsisArabidopsise1
Treatment
RabE down-regulatione0
Gene
RabEe0
Outcome
plant sizee0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis leaf cells”

✓ located verbatim in the source · abstract, characters 1128–1150 · show in text ↑
e0

“RabE down-regulation, due to cosuppression in transgenic plants, resulted in drastically altered leaf morphology and reduced plant size”

✓ located verbatim in the source · abstract, characters 1152–1287 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

RabE down-regulation did not affect susceptibility to P. syringae.

Taxon
ArabidopsisArabidopsise1
Treatment
RabE down-regulatione0
Interactor
P. syringaePseudomonas syringaee0pathogen
Gene
RabEe0
Outcome
plant susceptibility to pathogenic P. syringae bacteriae0
Direction
did not affecte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis leaf cells”

✓ located verbatim in the source · abstract, characters 1128–1150 · show in text ↑
e0

“RabE down-regulation did not affect plant susceptibility to pathogenic P. syringae bacteria”

✓ located verbatim in the source · abstract, characters 1387–1478 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Constitutively active RabE1d-Q74L enhanced Arabidopsis defenses and conferred resistance to P. syringae.

Taxon
ArabidopsisArabidopsise1
Treatment
expression of the constitutively active RabE1d-Q74Le0
Interactor
P. syringaePseudomonas syringaee0pathogen
Gene
RabE1d-Q74Le0
Outcome
plant defenses, conferring resistance to P. syringae infectione0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae
Pseudomonas syringae · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“Arabidopsis leaf cells”

✓ located verbatim in the source · abstract, characters 1128–1150 · show in text ↑
e0

“expression of the constitutively active RabE1d-Q74L enhanced plant defenses, conferring resistance to P. syringae infection”

✓ located verbatim in the source · abstract, characters 1492–1615 · show in text ↑

transgenic · Pseudomonas syringae · ArabidopsisPositive and negative results

3 papers: 1 positive, 2 negative or no effect

2 in the opposite direction

  1. negative
  2. negative
See all 3 papers →

loss of function · Pseudomonas syringae · ArabidopsisPositive and negative results

20 papers: 6 positive, 14 negative or no effect

13 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. positive
  3. positive

16 papers more in this group

See all 20 papers →

loss of function · growth · ArabidopsisPositive and negative results

234 papers: 51 positive, 183 negative or no effect

182 papers in the same direction as this paper · 51 in the opposite direction

  1. positive
  2. positive
  3. positive

230 papers more in this group

See all 234 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.