Paper · 2000 · Plant and Cell Physiology

Cloning of cDNA Encoding NtEPc, a Marker Protein for the Embryogenic Dedifferentiation of Immature Tobacco Pollen Grains Cultured in Vitro

M. Kyo; H. Miyatake; K. Mamezuka; et al.

9
claims
19
verbatim quotes
16
citations
3
research areas
✓
Open access

Abstract

We partially purified three Nicotiana tabacum L. embryogenic pollen-abundant phosphoproteins (NtEPa to c) which appeared in the cells undergoing a dedifferentiation process from immature pollen grains to embryogenic cells, caused by glutamine-deficiency in vitro. All the NtEPs had a highly conserved N-terminal amino acid sequence. Using degenerate oligonucleotide probes designed from the amino acid sequences, the cDNA for NtEPc was isolated from a cDNA library of pollen cultured in glutamine-free medium The cDNA sequence showed moderate homology with several type-1 copper-binding glycoproteins and with a kind of early nodulin though its function could not be predicted. Expression analysis revealed that the level of mRNA for NtEPc was high during the dedifferentiation and also in the very early period of pollen embryogenesis but it was low in the developmental process of microspores/pollen in anthers, in the in vitro maturation process and both in the stational and logarithmic growth phases of tobacco BY-2 cells. Furthermore, an acidic medium pH, which promoted the induction of dedifferentiation increased the level of mRNA for NtEPc, whereas the presence of 6-benzylaminopurine, which inhibited it, decreased the level. These results suggest that the expression of NtEPc gene is correlated with the dedifferentiation but not with pollen development or cell division.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

Three NtEP phosphoproteins appeared during pollen dedifferentiation.

Taxon
Nicotiana tabacum L.Nicotiana tabacume0
Organ / stage
immature pollen grainse0
Gene
NtEPa to ce0
Outcome
appeared in the cells undergoing a dedifferentiation processe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“three Nicotiana tabacum L. embryogenic pollen-abundant phosphoproteins (NtEPa to c) which appeared in the cells undergoing a dedifferentiation process from immature pollen grains to embryogenic cells”

✓ located verbatim in the source · abstract, characters 22–221 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The NtEP proteins had conserved N-terminal sequences.

Taxon
Nicotiana tabacum L.Nicotiana tabacume1
Gene
NtEPse0
Outcome
highly conserved N-terminal amino acid sequencee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“All the NtEPs had a highly conserved N-terminal amino acid sequence.”

✓ located verbatim in the source · abstract, characters 264–332 · show in text ↑
e1

“three Nicotiana tabacum L. embryogenic pollen-abundant phosphoproteins (NtEPa to c) which appeared in the cells undergoing a dedifferentiation process from immature pollen grains to embryogenic cells”

✓ located verbatim in the source · abstract, characters 22–221 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

A cDNA for NtEPc was isolated from glutamine-free cultured pollen.

Gene
NtEPce0
Outcome
cDNA for NtEPc was isolatede0

Not reportedComparatorValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the cDNA for NtEPc was isolated from a cDNA library of pollen cultured in glutamine-free medium”

✓ located verbatim in the source · abstract, characters 413–508 · show in text ↑
t0

“Immature Tobacco Pollen Grains”

✓ located verbatim in the source · title, characters 90–120 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NtEPc cDNA showed moderate homology to copper-binding glycoproteins and an early nodulin.

Gene
NtEPce1
Outcome
moderate homologye0
Comparator
several type-1 copper-binding glycoproteins and with a kind of early noduline0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“The cDNA sequence showed moderate homology with several type-1 copper-binding glycoproteins and with a kind of early nodulin”

✓ located verbatim in the source · abstract, characters 509–633 · show in text ↑
t0

“Immature Tobacco Pollen Grains”

✓ located verbatim in the source · title, characters 90–120 · show in text ↑
e1

“the cDNA for NtEPc was isolated from a cDNA library of pollen cultured in glutamine-free medium”

✓ located verbatim in the source · abstract, characters 413–508 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NtEPc mRNA was high during dedifferentiation and early pollen embryogenesis.

Organ / stage
pollen embryogenesise0
Gene
NtEPce0
Outcome
level of mRNAe0
Direction
highe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the level of mRNA for NtEPc was high during the dedifferentiation and also in the very early period of pollen embryogenesis”

✓ located verbatim in the source · abstract, characters 712–835 · show in text ↑
t0

“Immature Tobacco Pollen Grains”

✓ located verbatim in the source · title, characters 90–120 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

NtEPc mRNA was low during pollen development and in vitro maturation and BY-2 growth.

Organ / stage
microspores/pollen in antherse0
Gene
NtEPce1
Outcome
lowe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“it was low in the developmental process of microspores/pollen in anthers, in the in vitro maturation process and both in the stational and logarithmic growth phases of tobacco BY-2 cells.”

✓ located verbatim in the source · abstract, characters 840–1027 · show in text ↑
e1

“the cDNA for NtEPc was isolated from a cDNA library of pollen cultured in glutamine-free medium”

✓ located verbatim in the source · abstract, characters 413–508 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Acidic pH increased NtEPc mRNA.

Treatment
acidic medium pHe0
Gene
NtEPce0
Outcome
level of mRNA for NtEPce0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“an acidic medium pH, which promoted the induction of dedifferentiation increased the level of mRNA for NtEPc”

✓ located verbatim in the source · abstract, characters 1041–1149 · show in text ↑
t0

“Immature Tobacco Pollen Grains”

✓ located verbatim in the source · title, characters 90–120 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

6-benzylaminopurine decreased NtEPc mRNA.

Treatment
6-benzylaminopurinee0
Gene
NtEPce1
Outcome
levele0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the presence of 6-benzylaminopurine, which inhibited it, decreased the level.”

✓ located verbatim in the source · abstract, characters 1159–1236 · show in text ↑
t0

“Immature Tobacco Pollen Grains”

✓ located verbatim in the source · title, characters 90–120 · show in text ↑
e1

“the cDNA for NtEPc was isolated from a cDNA library of pollen cultured in glutamine-free medium”

✓ located verbatim in the source · abstract, characters 413–508 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors infer NtEPc expression correlates with dedifferentiation, but not pollen development or cell division.

Gene
NtEPce0
Outcome
dedifferentiatione0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“the expression of NtEPc gene is correlated with the dedifferentiation but not with pollen development or cell division.”

✓ located verbatim in the source · abstract, characters 1264–1383 · show in text ↑
t0

“Immature Tobacco Pollen Grains”

✓ located verbatim in the source · title, characters 90–120 · show in text ↑

ph · molecular: expression · Nicotiana tabacum (tobacco)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. negative
See all 2 papers →

in vitro · molecular: expression · Nicotiana tabacum (tobacco)Positive and negative results

12 papers: 6 positive, 6 negative or no effect

5 papers in the same direction as this paper · 6 in the opposite direction

  1. negative
  2. negative
  3. no effect

8 papers more in this group

See all 12 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.