Paper · 1994 · The Plant Journal

Characterization of two cDNAs that encode MAP kinase homologues in Arabidopsis thaliana and analysis of the possible role of auxin in activating such kinase activities in cultured cells

Tsuyoshi Mizoguchi; Yukiko Gotoh; Eisuke Nishida; et al.

8
claims
13
verbatim quotes
208
citations
2
research areas
—
Not open access

Abstract

Two cDNA clones, cATMPK1 and cATMPK2, encoding MAP kinases (mitogen-activated protein kinases) have been cloned from Arabidopsis thaliana and their nucleotide sequences have been determined. Putative proteins encoded by ATMPK1 and ATMPK2 genes, designated ATMPK1 and ATMPK2, contain 370 and 376 amino acid residues, respectively, and are 88.7% identical at the amino acid sequence level. ATMPK1 and ATMPK2 exhibit significant similarity to rat ERK2 (49%) and Xenopus MAP kinase (50%). The amino acid residues corresponding to the sites of phosphorylation (Thr-Glu-Tyr) that are involved in the activation of MAP kinases are conserved in ATMPK1 and ATMPK2. Northern blot analysis indicates that the ATMPK1 and ATMPK2 mRNAs are significantly present in all the organs except seeds. Genomic Southern blot analysis suggests that there are a few additional genes that are related to ATMPK1 and ATMPK2 in the Arabidopsis genome. Purified Xenopus MAP kinase kinase (MAPK kinase) phosphorylates ATMPK1 and ATMPK2 proteins that have been expressed in Escherichia coli, activating these enzymes. A rapid and transient activation of 46-kDa protein kinase activity that phosphorylated myelin basic protein (MBP) was detected when auxin-starved tobacco BY-2 cells were treated with synthetic auxin, 2,4-dichlorophenoxyacetic acid (2,4-D). Protein kinase activities which phosphorylated the recombinant ATMPK2 protein also increased rapidly after auxin treatment in the auxin-starved BY-2 cells. These results suggest that auxin may function as an activator of plant MAP kinase homologues, as do various mitogens in animal systems.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Two Arabidopsis MAP kinase cDNAs were cloned and sequenced.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Gene
cATMPK1 and cATMPK2e0
Outcome
nucleotide sequences have been determinede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Two cDNA clones, cATMPK1 and cATMPK2, encoding MAP kinases (mitogen-activated protein kinases) have been cloned from Arabidopsis thaliana and their nucleotide sequences have been determined.”

✓ located verbatim in the source · abstract, characters 0–190 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The putative proteins contain 370 and 376 residues and are 88.7% identical.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
ATMPK1 and ATMPK2e0
Outcome
88.7% identical at the amino acid sequence levele0
Value
88.7%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ATMPK1 and ATMPK2 genes, designated ATMPK1 and ATMPK2, contain 370 and 376 amino acid residues, respectively, and are 88.7% identical at the amino acid sequence level.”

✓ located verbatim in the source · abstract, characters 220–387 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Activation-site residues are conserved in ATMPK1 and ATMPK2.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
ATMPK1 and ATMPK2e0
Outcome
sites of phosphorylation (Thr-Glu-Tyr)e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The amino acid residues corresponding to the sites of phosphorylation (Thr-Glu-Tyr) that are involved in the activation of MAP kinases are conserved in ATMPK1 and ATMPK2.”

✓ located verbatim in the source · abstract, characters 485–655 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Both mRNAs occur in organs except seeds.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Gene
ATMPK1 and ATMPK2e0
Outcome
significantly present in all the organs except seedse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the ATMPK1 and ATMPK2 mRNAs are significantly present in all the organs except seeds”

✓ located verbatim in the source · abstract, characters 694–778 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Additional related genes may occur in the Arabidopsis genome.

Taxon
ArabidopsisArabidopsise0
Gene
ATMPK1 and ATMPK2e0
Outcome
a few additional genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“there are a few additional genes that are related to ATMPK1 and ATMPK2 in the Arabidopsis genome”

✓ located verbatim in the source · abstract, characters 825–921 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Xenopus MAP kinase kinase phosphorylated and activated both plant kinases.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
Purified Xenopus MAP kinase kinasee0
Outcome
phosphorylates ATMPK1 and ATMPK2 proteinse0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Purified Xenopus MAP kinase kinase (MAPK kinase) phosphorylates ATMPK1 and ATMPK2 proteins that have been expressed in Escherichia coli, activating these enzymes.”

✓ located verbatim in the source · abstract, characters 923–1085 · show in text ↑
t0

“Arabidopsis thaliana”

✓ located verbatim in the source · title, characters 67–87 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Auxin rapidly and transiently activated 46-kDa protein kinase activity in tobacco BY-2 cells.

Material
BY-2e0
Treatment
synthetic auxin, 2,4-dichlorophenoxyacetic acid (2,4-D)e0
Outcome
46-kDa protein kinase activitye0
Direction
activatione0
Comparator
auxin-starvede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“A rapid and transient activation of 46-kDa protein kinase activity that phosphorylated myelin basic protein (MBP) was detected when auxin-starved tobacco BY-2 cells were treated with synthetic auxin, 2,4-dichlorophenoxyacetic acid (2,4-D).”

✓ located verbatim in the source · abstract, characters 1086–1325 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Kinase activity phosphorylating ATMPK2 increased rapidly after auxin treatment.

Treatment
auxin treatmente0
Outcome
Protein kinase activitiese0
Direction
increasede0
Comparator
auxin-starvede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana tabacum
Nicotiana tabacum · TaxonJom / Joachim Müllerchen · CC BY 2.5 · Wikimedia Commons ↗

Verbatim

e0

“Protein kinase activities which phosphorylated the recombinant ATMPK2 protein also increased rapidly after auxin treatment in the auxin-starved BY-2 cells.”

✓ located verbatim in the source · abstract, characters 1326–1481 · show in text ↑
t0

“auxin-starved tobacco BY-2 cells”

✓ located verbatim in the source · abstract, characters 1218–1250 · show in text ↑

class · physiology: enzyme activity · Nicotiana tabacum (tobacco)Positive and negative results

4 papers: 2 positive, 2 negative or no effect

1 paper in the same direction as this paper · 2 in the opposite direction

  1. no effect
  2. negative
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.