Paper · 2012 · PLANT PHYSIOLOGY

The Impact of the Long-Distance Transport of aBEL1-Like Messenger RNA on Development

Tian Lin; Pooja Sharma; Daniel H. Gonzalez; et al.

8
claims
17
verbatim quotes
91
citations
2
research areas
✓
Open access · cc-by

Abstract

BEL1- and KNOTTED1-type proteins are transcription factors from the three-amino-loop-extension superclass that interact in a tandem complex to regulate the expression of target genes. In potato (Solanum tuberosum), StBEL5 and its Knox protein partner regulate tuberization by targeting genes that control growth. RNA movement assays demonstrated that StBEL5 transcripts move through the phloem to stolon tips, the site of tuber induction. StBEL5 messenger RNA originates in the leaf, and its movement to stolons is induced by a short-day photoperiod. Here, we report the movement of StBEL5 RNA to roots correlated with increased growth, changes in morphology, and accumulation of GA2-oxidase1, YUCCA1a, and ISOPENTENYL TRANSFERASE transcripts. Transcription of StBEL5 in leaves is induced by light but insensitive to photoperiod, whereas in stolon tips growing in the dark, promoter activity is enhanced by short days. The heterodimer of StBEL5 and POTH1, a KNOTTED1-type transcription factor, binds to a tandem TTGAC-TTGAC motif that is essential for regulating transcription. The discovery of an inverted tandem motif in the StBEL5 promoter with TTGAC motifs on opposite strands may explain the induction of StBEL5 promoter activity in stolon tips under short days. Using transgenic potato lines, deletion of one of the TTGAC motifs from the StBEL5 promoter results in the reduction of GUS activity in new tubers and roots. Gel-shift assays demonstrate BEL5/POTH1 binding specificity to the motifs present in the StBEL5 promoter and a double tandem motif present in the StGA2-oxidase1 promoter. These results suggest that, in addition to tuberization, the movement of StBEL5 messenger RNA regulates other aspects of vegetative development.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 8

Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

StBEL5 RNA movement to roots correlated with increased root growth and morphology changes.

Taxon
potato (Solanum tuberosum)Solanum tuberosume1
Organ / stage
rootse0
Gene
StBEL5e0
Outcome
increased growth, changes in morphologye0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the movement of StBEL5 RNA to roots correlated with increased growth, changes in morphology”

✓ located verbatim in the source · abstract, characters 567–658 · show in text ↑
e1

“potato (Solanum tuberosum)”

✓ located verbatim in the source · abstract, characters 187–213 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

StBEL5 RNA movement to roots correlated with accumulation of GA2-oxidase1, YUCCA1a and ISOPENTENYL TRANSFERASE transcripts.

Taxon
potato (Solanum tuberosum)Solanum tuberosume1
Organ / stage
rootse0
Gene
StBEL5e0
Outcome
accumulation of GA2-oxidase1, YUCCA1a, and ISOPENTENYL TRANSFERASE transcriptse0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“the movement of StBEL5 RNA to roots correlated with increased growth, changes in morphology, and accumulation of GA2-oxidase1, YUCCA1a, and ISOPENTENYL TRANSFERASE transcripts”

✓ located verbatim in the source · abstract, characters 567–742 · show in text ↑
e1

“potato (Solanum tuberosum)”

✓ located verbatim in the source · abstract, characters 187–213 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Light induced StBEL5 transcription in leaves, independent of photoperiod.

Taxon
potato (Solanum tuberosum)Solanum tuberosume1
Organ / stage
leavese0
Treatment
lighte0
Gene
StBEL5e0
Outcome
Transcription of StBEL5e0
Direction
inducede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Transcription of StBEL5 in leaves is induced by light but insensitive to photoperiod”

✓ located verbatim in the source · abstract, characters 744–828 · show in text ↑
e1

“potato (Solanum tuberosum)”

✓ located verbatim in the source · abstract, characters 187–213 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Short days enhanced StBEL5 promoter activity in dark grown stolon tips.

Taxon
potato (Solanum tuberosum)Solanum tuberosume1
Organ / stage
stolon tipse0
Treatment
short dayse0
Gene
StBEL5e2
Outcome
promoter activitye0
Direction
enhancede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“in stolon tips growing in the dark, promoter activity is enhanced by short days”

✓ located verbatim in the source · abstract, characters 838–917 · show in text ↑
e1

“potato (Solanum tuberosum)”

✓ located verbatim in the source · abstract, characters 187–213 · show in text ↑
e2

“Transcription of StBEL5 in leaves is induced by light”

✓ located verbatim in the source · abstract, characters 744–797 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The StBEL5 and POTH1 heterodimer binds a tandem TTGAC-TTGAC motif needed for transcriptional regulation.

Taxon
potato (Solanum tuberosum)Solanum tuberosume1
Gene
StBEL5 and POTH1e0
Outcome
binds to a tandem TTGAC-TTGAC motife0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The heterodimer of StBEL5 and POTH1, a KNOTTED1-type transcription factor, binds to a tandem TTGAC-TTGAC motif that is essential for regulating transcription.”

✓ located verbatim in the source · abstract, characters 919–1077 · show in text ↑
e1

“potato (Solanum tuberosum)”

✓ located verbatim in the source · abstract, characters 187–213 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

An inverted tandem motif with TTGAC motifs on opposite strands was found in the StBEL5 promoter.

Taxon
potato (Solanum tuberosum)Solanum tuberosume1
Gene
StBEL5e0
Outcome
inverted tandem motife0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The discovery of an inverted tandem motif in the StBEL5 promoter with TTGAC motifs on opposite strands”

✓ located verbatim in the source · abstract, characters 1078–1180 · show in text ↑
e1

“potato (Solanum tuberosum)”

✓ located verbatim in the source · abstract, characters 187–213 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Deleting one TTGAC motif from the StBEL5 promoter reduced GUS activity in new tubers and roots.

Organ / stage
new tubers and rootse0
Treatment
deletion of one of the TTGAC motifse0
Gene
StBEL5e0
Outcome
GUS activitye0
Direction
reductione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“deletion of one of the TTGAC motifs from the StBEL5 promoter results in the reduction of GUS activity in new tubers and roots”

✓ located verbatim in the source · abstract, characters 1299–1424 · show in text ↑
e1

“Using transgenic potato lines”

✓ located verbatim in the source · abstract, characters 1268–1297 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Gel-shift assays showed BEL5/POTH1 binding specificity to StBEL5 and StGA2-oxidase1 promoter motifs.

Taxon
potato (Solanum tuberosum)Solanum tuberosume1
Gene
BEL5/POTH1e0
Outcome
BEL5/POTH1 binding specificitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Gel-shift assays demonstrate BEL5/POTH1 binding specificity to the motifs present in the StBEL5 promoter and a double tandem motif present in the StGA2-oxidase1 promoter.”

✓ located verbatim in the source · abstract, characters 1426–1596 · show in text ↑
e1

“potato (Solanum tuberosum)”

✓ located verbatim in the source · abstract, characters 187–213 · show in text ↑

loss of function · molecular: expression · Solanum tuberosum (potato)Positive and negative results

17 papers: 6 positive, 11 negative or no effect

10 papers in the same direction as this paper · 6 in the opposite direction

  1. positive
  2. positive
  3. positive

13 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.