Paper · 2005 · Journal of Proteome Research

A Proteomic Approach To Analyze Auxin- and Zinc-Responsive Protein in Rice

Guangxiao Yang; Akihiko Inoue; Hironori Takasaki; et al.

8
claims
8
verbatim quotes
37
citations
3
research areas
—
Not open access

Abstract

Auxin and zinc are involved in callus and root formation in rice. However, details of the mechanism underlying this process and functional relation between zinc and auxin are unclear. In this study, proteins induced by auxin and zinc in rice were analyzed by a proteomic approach. Root formation on rice seedlings was promoted by 0.45 microM 2,4-D treatment and was further promoted by addition of 260 microM Zn. Microscopic observation revealed that the number of root primodia formed was significantly increased in 2,4-D- and Zn-treated seedlings than that of the control. A total of seven proteins, as analyzed by 2D-PAGE, were increased, and one protein was decreased by 2,4-D and Zn treatment. Expression of elongation factor-1beta' (EF-1beta') both at transcriptional and translational levels was particular abundant in callus and basal parts of young seedlings, and the accumulation of EF-1beta' was consistent with root formation induced by 2,4-D and Zn. Results indicate that higher level of EF-1beta' expression is necessary for auxin- and zinc-induced root formation in rice.

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Claims 8

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

2,4-D promoted rice seedling root formation.

Taxon
rice seedlingsOryza sativae0
Treatment
0.45 microM 2,4-D treatmente0
Outcome
Root formatione0
Direction
promotede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Root formation on rice seedlings was promoted by 0.45 microM 2,4-D treatment”

✓ located verbatim in the source · abstract, characters 281–357 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Adding zinc further promoted root formation in 2,4-D-treated rice seedlings.

Taxon
rice seedlingsOryza sativae0
Treatment
addition of 260 microM Zne0
Outcome
Root formatione0
Direction
further promotede0
Comparator
0.45 microM 2,4-D treatmente0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Root formation on rice seedlings was promoted by 0.45 microM 2,4-D treatment and was further promoted by addition of 260 microM Zn.”

✓ located verbatim in the source · abstract, characters 281–412 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Combined 2,4-D and zinc treatment increased root primordia number relative to the control.

Taxon
seedlingse0
Treatment
2,4-D- and Zn-treatede0
Outcome
number of root primodia formede0
Direction
increasede0
Comparator
the controle0

Verbatim

e0

“the number of root primodia formed was significantly increased in 2,4-D- and Zn-treated seedlings than that of the control”

✓ located verbatim in the source · abstract, characters 451–573 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Seven proteins increased under combined 2,4-D and zinc treatment.

Treatment
2,4-D and Zn treatmente0
Outcome
seven proteinse0
Direction
increasede0
Value
sevene0

Not reportedTaxonComparator

Verbatim

e0

“A total of seven proteins, as analyzed by 2D-PAGE, were increased, and one protein was decreased by 2,4-D and Zn treatment.”

✓ located verbatim in the source · abstract, characters 575–698 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

One protein decreased under combined 2,4-D and zinc treatment.

Treatment
2,4-D and Zn treatmente0
Outcome
one proteine0
Direction
decreasede0
Value
onee0

Not reportedTaxonComparator

Verbatim

e0

“A total of seven proteins, as analyzed by 2D-PAGE, were increased, and one protein was decreased by 2,4-D and Zn treatment.”

✓ located verbatim in the source · abstract, characters 575–698 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

EF-1beta expression at transcriptional and translational levels was abundant in rice callus and basal regions of young seedlings.

Organ / stage
callus and basal parts of young seedlingse0
Gene
elongation factor-1beta' (EF-1beta')e0
Outcome
Expressione0

Not reportedTaxon

Verbatim

e0

“Expression of elongation factor-1beta' (EF-1beta') both at transcriptional and translational levels was particular abundant in callus and basal parts of young seedlings”

✓ located verbatim in the source · abstract, characters 699–867 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

EF-1beta accumulation was consistent with root formation induced by 2,4-D and zinc.

Treatment
2,4-D and Zne0
Gene
EF-1beta'e0
Outcome
root formatione0
Direction
consistent withe0

Not reportedTaxon

Verbatim

e0

“the accumulation of EF-1beta' was consistent with root formation induced by 2,4-D and Zn”

✓ located verbatim in the source · abstract, characters 873–961 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors infer that higher EF-1beta expression is necessary for auxin- and zinc-induced rice root formation.

Treatment
auxin- and zinc-inducede0
Gene
EF-1beta'e0
Outcome
root formatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“higher level of EF-1beta' expression is necessary for auxin- and zinc-induced root formation in rice”

✓ located verbatim in the source · abstract, characters 985–1085 · show in text ↑

zinc atom · growth · Oryza sativa (rice)Results differ

132 papers: 118 positive, 14 negative or no effect

117 papers in the same direction as this paper · 13 in the opposite direction · 1 reporting no difference from an alternative

  1. positive
  2. no effect
  3. negative

128 papers more in this group

See all 132 papers →

zinc atom · quality: protein · Oryza sativa (rice)Positive and negative results

33 papers: 30 positive, 3 negative or no effect

2 papers in the same direction as this paper · 30 in the opposite direction

  1. positive
  2. positive
  3. positive

29 papers more in this group

See all 33 papers →

2,4-D · growth · Oryza sativa (rice)Positive and negative results

107 papers: 102 positive, 5 negative or no effect

101 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. no effect

103 papers more in this group

See all 107 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.