Paper · 2014 · Acta Physiologiae Plantarum

NAC transcription factor expression, amino acid concentration and growth of elite rice cultivars upon salt stress

Soledad García-Morales; Fernando Carlos Gómez-Merino; Libia Iris Trejo-Téllez

7
claims
17
verbatim quotes
18
citations
2
research areas
✓
Open access · cc-by

Abstract

NAC transcription factors (TF) play important roles in regulating osmotic stress tolerance in plants. We tested the expression of 57 NAC genes in the presence of NaCl in young leaves of two elite rice cultivars, Cotaxtla and Tres Ríos, which display contrasting responses to salinity at the biochemical and physiological levels. Using qRT-PCR, the expression of 41 out of 57 NAC genes was validated, of which 23 showed regulation by NaCl. We identified two NAC genes ( Os02g56600 and Os12g07790 ) induced in Cotaxtla, but repressed in Tres Ríos when plants were exposed to 100 mM NaCl in nutrient solution. In both elite cultivars, treated plants showed higher concentrations of total amino acids and proline in comparison to the controls; in all cases, Cotaxtla plants accumulated more free amino acids and proline than Tres Ríos plants. Furthermore, shoot growth was more affected in both cultivars, while root length was not reduced in treated plants in comparison to the controls. We conclude that both elite rice cultivars exhibit different expression patterns of NAC transcription factors as well as biochemical and physiological responses to salt stress, giving rise to better performance of Cotaxtla plants in comparison to Tres Ríos plants under our experimental conditions.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

Of 41 NAC genes validated by qRT-PCR, 23 showed regulation by NaCl in rice leaves.

Treatment
NaCle0
Outcome
regulation by NaCle0
Value
23e0
Qualifier
41 out of 57 NAC genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Using qRT-PCR, the expression of 41 out of 57 NAC genes was validated, of which 23 showed regulation by NaCl”

✓ located verbatim in the source · abstract, characters 329–437 · show in text ↑
t0

“elite rice cultivars”

✓ located verbatim in the source · title, characters 76–96 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Two NAC genes were induced by 100 mM NaCl in the Cotaxtla rice cultivar.

Material
Cotaxtlae1
Treatment
100 mM NaCle1
Gene
Os02g56600 and Os12g07790e1
Outcome
NAC genese1
Direction
inducede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“We identified two NAC genes ( Os02g56600 and Os12g07790 ) induced in Cotaxtla, but repressed in Tres Ríos when plants were exposed to 100 mM NaCl in nutrient solution”

✓ located verbatim in the source · abstract, characters 439–605 · show in text ↑
t0

“elite rice cultivars”

✓ located verbatim in the source · title, characters 76–96 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Two NAC genes were repressed by 100 mM NaCl in the Tres Ríos rice cultivar.

Material
Tres Ríose1
Treatment
100 mM NaCle1
Gene
Os02g56600 and Os12g07790e1
Outcome
NAC genese1
Direction
repressede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“We identified two NAC genes ( Os02g56600 and Os12g07790 ) induced in Cotaxtla, but repressed in Tres Ríos when plants were exposed to 100 mM NaCl in nutrient solution”

✓ located verbatim in the source · abstract, characters 439–605 · show in text ↑
t0

“elite rice cultivars”

✓ located verbatim in the source · title, characters 76–96 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Under NaCl, treated rice plants had higher total amino acids and proline than controls in both cultivars.

Treatment
100 mM NaCle1
Outcome
total amino acids and prolinee2
Direction
highere2
Comparator
controlse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“exposed to 100 mM NaCl in nutrient solution”

✓ located verbatim in the source · abstract, characters 562–605 · show in text ↑
e2

“In both elite cultivars, treated plants showed higher concentrations of total amino acids and proline in comparison to the controls”

✓ located verbatim in the source · abstract, characters 607–738 · show in text ↑
t0

“elite rice cultivars”

✓ located verbatim in the source · title, characters 76–96 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Cotaxtla plants accumulated more free amino acids and proline than Tres Ríos plants under NaCl.

Material
Cotaxtlae3
Outcome
free amino acids and prolinee3
Direction
accumulated moree3
Comparator
Tres Ríose3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e3

“in all cases, Cotaxtla plants accumulated more free amino acids and proline than Tres Ríos plants”

✓ located verbatim in the source · abstract, characters 740–837 · show in text ↑
t0

“elite rice cultivars”

✓ located verbatim in the source · title, characters 76–96 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Under NaCl, shoot growth was more affected than in controls in both cultivars.

Treatment
100 mM NaCle1
Outcome
shoot growthe4
Direction
more affectede4
Comparator
controlse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“exposed to 100 mM NaCl in nutrient solution”

✓ located verbatim in the source · abstract, characters 562–605 · show in text ↑
e4

“Furthermore, shoot growth was more affected in both cultivars, while root length was not reduced in treated plants in comparison to the controls”

✓ located verbatim in the source · abstract, characters 839–983 · show in text ↑
t0

“elite rice cultivars”

✓ located verbatim in the source · title, characters 76–96 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Under NaCl, root length was not reduced in treated plants compared with controls.

Treatment
100 mM NaCle1
Outcome
root lengthe4
Direction
not reducede4
Comparator
controlse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e1

“exposed to 100 mM NaCl in nutrient solution”

✓ located verbatim in the source · abstract, characters 562–605 · show in text ↑
e4

“Furthermore, shoot growth was more affected in both cultivars, while root length was not reduced in treated plants in comparison to the controls”

✓ located verbatim in the source · abstract, characters 839–983 · show in text ↑
t0

“elite rice cultivars”

✓ located verbatim in the source · title, characters 76–96 · show in text ↑

sodium chloride · growth · Oryza sativa (rice)Results differ

128 papers: 28 positive, 100 negative or no effect

99 papers in the same direction as this paper · 28 in the opposite direction

  1. negative
  2. positive
  3. positive

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.