Paper · 2012 · Rice

Phenomics of rice early vigour and drought response: Are sugar related and morphogenetic traits relevant?

Maria-Camila Rebolledo; Michael Dingkuhn; Anne Clément-Vidal; et al.

8
claims
16
verbatim quotes
43
citations
2
research areas
✓
Open access · cc-by

Abstract

BACKGROUND: Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L). Little is known on trade-offs with drought tolerance. This study explored the relevance of (sugar) metabolic and morphogenetic traits to describe the genetic diversity of rice early vigour and its phenotypic plasticity under drought conditions. A greenhouse experiment was conducted to characterize on a panel of 43 rice genotypes plant morphogenesis and sugar concentration in expanded (source) and expanding (sink) leaves. RESULTS: Across genotypes in control treatment, leaf starch concentration was negatively correlated with organogenetic development rate (DR, defined as leaf appearance rate on main stem). Genotypes with small leaves had high DR and tiller number but low leaf starch concentration. Under drought, vigorous genotypes showed stronger growth reduction. Starch concentration decreased in source leaves, by contrast with soluble sugars and with that observed in sink leaves. Accordingly, genotypes were grouped in three clusters differing in constitutive vigour, starch storage and growth maintenance under drought showing a trade off between constitutive vigour and drought tolerance. CONCLUSIONS: It was therefore suggested that non structural carbohydrates, particularly starch, were relevant markers of early vigour. Their relevance as markers of growth maintenance under drought needs to be further explored. Results are discussed regarding novel process based traits to be introduced in the GRiSP (Global Rice Science Partnership) phenotyping network.

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Claims 8

Associationobservedoriginal resultmeasured

Claim · model-written summary

Across genotypes in the control treatment, leaf starch concentration was negatively correlated with organogenetic development rate in rice.

Treatment
control treatmente1
Compound
starche1
Outcome
organogenetic development ratee1
Direction
negatively correlatede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 12–110 · show in text ↑
e1

“Across genotypes in control treatment, leaf starch concentration was negatively correlated with organogenetic development rate”

✓ located verbatim in the source · abstract, characters 546–672 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

In rice, genotypes with small leaves had high development rate (DR) and high tiller number.

Material
Genotypes with small leavese2
Outcome
DR and tiller numbere2
Direction
highe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 12–110 · show in text ↑
e2

“Genotypes with small leaves had high DR and tiller number but low leaf starch concentration”

✓ located verbatim in the source · abstract, characters 725–816 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

In rice, genotypes with small leaves had low leaf starch concentration.

Material
Genotypes with small leavese2
Outcome
leaf starch concentratione2
Direction
lowe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 12–110 · show in text ↑
e2

“Genotypes with small leaves had high DR and tiller number but low leaf starch concentration”

✓ located verbatim in the source · abstract, characters 725–816 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Under drought, vigorous rice genotypes showed stronger growth reduction.

Material
vigorous genotypese3
Treatment
Under droughte3
Outcome
growth reductione3
Direction
strongere3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 12–110 · show in text ↑
e3

“Under drought, vigorous genotypes showed stronger growth reduction”

✓ located verbatim in the source · abstract, characters 818–884 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Starch concentration decreased in source leaves of rice, in contrast to soluble sugars and to sink leaves.

Organ / stage
source leavese4
Outcome
Starch concentratione4
Direction
decreasede4
Qualifier
by contrast with soluble sugars and with that observed in sink leavese4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 12–110 · show in text ↑
e4

“Starch concentration decreased in source leaves, by contrast with soluble sugars and with that observed in sink leaves”

✓ located verbatim in the source · abstract, characters 886–1004 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Rice genotypes were grouped into three clusters differing in constitutive vigour, starch storage and growth maintenance under drought.

Material
genotypese5
Outcome
three clusterse5
Qualifier
differing in constitutive vigour, starch storage and growth maintenance under droughte5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 12–110 · show in text ↑
e5

“genotypes were grouped in three clusters differing in constitutive vigour, starch storage and growth maintenance under drought”

✓ located verbatim in the source · abstract, characters 1019–1145 · show in text ↑
Associationobservedoriginal resultmixedmeasured

Claim · model-written summary

In rice, constitutive vigour showed a trade-off with drought tolerance.

Treatment
droughte6
Outcome
trade off between constitutive vigour and drought tolerancee6

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 12–110 · show in text ↑
e6

“showing a trade off between constitutive vigour and drought tolerance”

✓ located verbatim in the source · abstract, characters 1146–1215 · show in text ↑
Associationauthor interpretationoriginal resultmeasured

Claim · model-written summary

Non-structural carbohydrates, particularly starch, were suggested to be relevant markers of early vigour in rice.

Compound
non structural carbohydrates, particularly starche7
Outcome
relevant markers of early vigoure7

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Early vigour (biomass accumulation) is a useful but complex trait in rainfed rice (Oryza sativa L)”

✓ located verbatim in the source · abstract, characters 12–110 · show in text ↑
e7

“non structural carbohydrates, particularly starch, were relevant markers of early vigour”

✓ located verbatim in the source · abstract, characters 1262–1350 · show in text ↑

drought · growth · Oryza sativa (rice)Positive and negative results

282 papers: 98 positive, 184 negative or no effect

183 papers in the same direction as this paper · 98 in the opposite direction

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.