Paper · 2006 · Journal of Experimental Botany

Duplicate maize 13-lipoxygenase genes are differentially regulated by circadian rhythm, cold stress, wounding, pathogen infection, and hormonal treatments

Andriy Nemchenko; Susan Kunze; Ivo Feussner; et al.

12
claims
23
verbatim quotes
152
citations
3
research areas
—
Not open access

Abstract

Most plant oxylipins, a large class of diverse oxygenated polyunsaturated fatty acids and their derivatives, are produced through the lipoxygenase (LOX) pathway. Recent progress in dicots has highlighted the biological roles of oxylipins in plant defence responses to pathogens and pests. By contrast, the physiological function of LOXs and their metabolites in monocots is poorly understood. Two maize LOXs, ZmLOX10 and ZmLOX11 that share >90% amino acid sequence identity but are localized on different chromosomes, were cloned and characterized. Phylogenetic analysis revealed that ZmLOX10 and ZmLOX11 cluster together with well-characterized plastidic type 2 linoleate 13-LOXs from diverse plant species. Regio-specificity analysis of recombinant ZmLOX10 protein overexpressed in Escherichia coli proved it to be a linoleate 13-LOX with a pH optimum at approximately pH 8.0. Both predicted proteins contain putative transit peptides for chloroplast import. ZmLOX10 was preferentially expressed in leaves and was induced in response to wounding, cold stress, defence-related hormones jasmonic acid (JA), salicylic acid (SA), and abscisic acid (ABA), and inoculation with an avirulent strain of Cochliobolus carbonum. These data suggested a role for this gene in maize adaptation to abiotic stresses and defence responses against pathogens and pests. ZmLOX11 was preferentially expressed in silks and was induced in leaves only by ABA, indicating its possible involvement in responses to osmotic stress. In leaves, mRNA accumulation of ZmLOX10 is strictly regulated by a circadian rhythm, with maximal expression coinciding temporally with the highest photosynthetic activity. This study reveals the evolutionary divergence of physiological roles for relatively recently duplicated genes. Possible physiological functions of these 13-LOXs are suggested.

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Claims 12

Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmLOX10 and ZmLOX11 share over 90% amino acid sequence identity but lie on different chromosomes.

Taxon
maizeZea mayse0
Gene
ZmLOX10 and ZmLOX11e0
Outcome
amino acid sequence identitye0
Value
>90%e0
Qualifier
different chromosomese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Two maize LOXs, ZmLOX10 and ZmLOX11 that share >90% amino acid sequence identity but are localized on different chromosomes”

✓ located verbatim in the source · abstract, characters 393–516 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The two LOXs cluster with plastidic type 2 linoleate 13-LOXs.

Taxon
maizeZea mayst0
Gene
ZmLOX10 and ZmLOX11e0
Outcome
cluster together with well-characterized plastidic type 2 linoleate 13-LOXse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmLOX10 and ZmLOX11 cluster together with well-characterized plastidic type 2 linoleate 13-LOXs from diverse plant species”

✓ located verbatim in the source · abstract, characters 585–707 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Recombinant ZmLOX10 is a linoleate 13-LOX with a pH optimum near 8.0.

Taxon
maizeZea mayst0
Gene
ZmLOX10e0
Outcome
linoleate 13-LOXe0
Value
approximately pH 8.0e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Regio-specificity analysis of recombinant ZmLOX10 protein overexpressed in Escherichia coli proved it to be a linoleate 13-LOX with a pH optimum at approximately pH 8.0.”

✓ located verbatim in the source · abstract, characters 709–878 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Both predicted proteins have putative chloroplast transit peptides.

Taxon
maizeZea mayst0
Outcome
putative transit peptides for chloroplast importe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Both predicted proteins contain putative transit peptides for chloroplast import.”

✓ located verbatim in the source · abstract, characters 879–960 · show in text ↑
t0

“maize 13-lipoxygenase genes”

✓ located verbatim in the source · title, characters 10–37 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmLOX10 expression is preferential in leaves.

Taxon
maizeZea mayst0
Organ / stage
leavese0
Gene
ZmLOX10e0
Outcome
preferentially expressed in leavese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmLOX10 was preferentially expressed in leaves”

✓ located verbatim in the source · abstract, characters 961–1007 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Wounding induces ZmLOX10.

Taxon
maizeZea mayst0
Treatment
woundinge0
Gene
ZmLOX10e0
Outcome
ZmLOX10 was preferentially expressede0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmLOX10 was preferentially expressed in leaves and was induced in response to wounding”

✓ located verbatim in the source · abstract, characters 961–1047 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Cold stress induces ZmLOX10.

Taxon
maizeZea mayst0
Treatment
cold stresse0
Outcome
was inducede0
Direction
inducede0

Not reportedGeneComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“was induced in response to wounding, cold stress”

✓ located verbatim in the source · abstract, characters 1012–1060 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Jasmonic acid, salicylic acid, and abscisic acid each induce ZmLOX10.

Taxon
maizeZea mayst0
Treatment
defence-related hormones jasmonic acid (JA), salicylic acid (SA), and abscisic acid (ABA)e0
Outcome
was inducede0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“was induced in response to wounding, cold stress, defence-related hormones jasmonic acid (JA), salicylic acid (SA), and abscisic acid (ABA)”

✓ located verbatim in the source · abstract, characters 1012–1151 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with an avirulent Cochliobolus carbonum strain induces ZmLOX10.

Taxon
maizeZea mayst0
Treatment
inoculation with an avirulent strain of Cochliobolus carbonume0
Interactor
Cochliobolus carbonumBipolaris zeicolae0pathogen
Outcome
was inducede0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗
Bipolaris zeicola
Bipolaris zeicola · InteractorEric McKenzie · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

e0

“was induced in response to wounding, cold stress, defence-related hormones jasmonic acid (JA), salicylic acid (SA), and abscisic acid (ABA), and inoculation with an avirulent strain of Cochliobolus carbonum.”

✓ located verbatim in the source · abstract, characters 1012–1219 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ZmLOX11 expression is preferential in silks.

Taxon
maizeZea mayst0
Organ / stage
silkse0
Gene
ZmLOX11e0
Outcome
preferentially expressed in silkse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmLOX11 was preferentially expressed in silks”

✓ located verbatim in the source · abstract, characters 1353–1398 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ABA alone induced ZmLOX11 in leaves.

Taxon
maizeZea mayst0
Organ / stage
leavese0
Treatment
ABAe0
Gene
ZmLOX11e0
Outcome
ZmLOX11 was preferentially expressede0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“ZmLOX11 was preferentially expressed in silks and was induced in leaves only by ABA”

✓ located verbatim in the source · abstract, characters 1353–1436 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

ZmLOX10 leaf mRNA follows a circadian rhythm with maximal expression at peak photosynthetic activity.

Taxon
maizeZea mayst0
Organ / stage
leavese0
Gene
ZmLOX10e0
Outcome
mRNA accumulation of ZmLOX10e0
Direction
maximale0
Qualifier
highest photosynthetic activitye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“In leaves, mRNA accumulation of ZmLOX10 is strictly regulated by a circadian rhythm, with maximal expression coinciding temporally with the highest photosynthetic activity.”

✓ located verbatim in the source · abstract, characters 1506–1678 · show in text ↑
t0

“maize”

✓ located verbatim in the source · title, characters 10–15 · show in text ↑

(+)-abscisic acid · molecular: expression · Zea mays (maize)Results differ

51 papers: 37 positive, 14 negative or no effect

36 papers in the same direction as this paper · 14 in the opposite direction

  1. negative
  2. no effect
  3. no effect

47 papers more in this group

See all 51 papers →

mechanical · molecular: expression · Zea mays (maize)Positive and negative results

8 papers: 7 positive, 1 negative or no effect

6 papers in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
  3. positive

4 papers more in this group

See all 8 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.