Paper · 2011 · Plant Methods

An improved protocol for efficient transformation and regeneration of diverse indica rice cultivars

Khirod K Sahoo; Amit K Tripathi; Ashwani Pareek; et al.

6
claims
12
verbatim quotes
222
citations
3
research areas
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Open access · cc-by

Abstract

BACKGROUND: Rice genome sequencing projects have generated remarkable amount of information about genes and genome architecture having tremendous potential to be utilized in both basic and applied research. Success in transgenics is paving the way for preparing a road map of functional genomics which is expected to correlate action of a gene to a trait in cellular and organismal context. However, the lack of a simple and efficient method for transformation and regeneration is a major constraint for such studies in this important cereal crop. RESULTS: In the present study, we have developed an easy, rapid and highly efficient transformation and regeneration protocol using mature seeds as explants and found its successful applicability to a choice of elite indica rice genotypes. We have optimized various steps of transformation and standardized different components of the regeneration medium including growth hormones and the gelling agent. The modified regeneration medium triggers production of large number of shoots from smaller number of calli and promotes their faster growth, hence significantly advantageous over the existing protocols where the regeneration step requires maximum time. Using this protocol, significantly higher transformation efficiency (up to 46%) and regeneration frequency (up to 92% for the untransformed calli and 59% for the transformed calli) were achieved for the four tested cultivars. We have used this protocol to produce hundreds of independent transgenic lines of different indica rice genotypes. Upon maturity, these transgenic lines were fertile thereby indicating that faster regeneration during tissue culture did not affect their reproductive potential. CONCLUSIONS: This speedy, yet less labor-intensive, protocol overcomes major limitations associated with genetic manipulation in rice. Moreover, our protocol uses mature seeds as the explant, which can easily be obtained in quantity throughout the year and kept viable for a long time. Such an easy, efficient and generalized protocol has the potential to be a major tool for crop improvement and gene-function studies on the model monocot plant rice.

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Claims 6

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

The modified regeneration medium produced more shoots from fewer calli and promoted faster growth than existing protocols.

Treatment
modified regeneration mediume0
Outcome
production of large number of shoots from smaller number of calli and promotes their faster growthe0
Direction
large numbere0
Comparator
existing protocolse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Indica Group
Oryza sativa Indica Group · TaxonNo machine-readable author provided. Ranveig assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“The modified regeneration medium triggers production of large number of shoots from smaller number of calli and promotes their faster growth, hence significantly advantageous over the existing protocols”

✓ located verbatim in the source · abstract, characters 952–1154 · show in text ↑
t0

“indica rice”

✓ located verbatim in the source · title, characters 78–89 · show in text ↑
Method / resourceobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

The protocol achieved transformation efficiency up to 46% in four tested cultivars.

Outcome
transformation efficiencye0
Direction
highere0
Value
46%e0
Qualifier
four tested cultivarse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Indica Group
Oryza sativa Indica Group · TaxonNo machine-readable author provided. Ranveig assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“significantly higher transformation efficiency (up to 46%) and regeneration frequency (up to 92% for the untransformed calli and 59% for the transformed calli) were achieved for the four tested cultivars”

✓ located verbatim in the source · abstract, characters 1227–1430 · show in text ↑
t0

“indica rice”

✓ located verbatim in the source · title, characters 78–89 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Regeneration frequency reached 92% for untransformed calli.

Material
untransformed callie0
Outcome
regeneration frequencye0
Value
92%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Indica Group
Oryza sativa Indica Group · TaxonNo machine-readable author provided. Ranveig assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“regeneration frequency (up to 92% for the untransformed calli and 59% for the transformed calli)”

✓ located verbatim in the source · abstract, characters 1290–1386 · show in text ↑
t0

“indica rice”

✓ located verbatim in the source · title, characters 78–89 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

Regeneration frequency reached 59% for transformed calli.

Material
transformed callie0
Outcome
regeneration frequencye0
Value
59%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Indica Group
Oryza sativa Indica Group · TaxonNo machine-readable author provided. Ranveig assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“regeneration frequency (up to 92% for the untransformed calli and 59% for the transformed calli)”

✓ located verbatim in the source · abstract, characters 1290–1386 · show in text ↑
t0

“indica rice”

✓ located verbatim in the source · title, characters 78–89 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The protocol produced hundreds of independent transgenic lines of different indica rice genotypes.

Outcome
independent transgenic linese0
Value
hundredse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Indica Group
Oryza sativa Indica Group · TaxonNo machine-readable author provided. Ranveig assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“We have used this protocol to produce hundreds of independent transgenic lines of different indica rice genotypes.”

✓ located verbatim in the source · abstract, characters 1432–1546 · show in text ↑
t0

“indica rice”

✓ located verbatim in the source · title, characters 78–89 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

The transgenic rice lines were fertile at maturity.

Organ / stage
maturitye0
Outcome
transgenic lines were fertilee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa Indica Group
Oryza sativa Indica Group · TaxonNo machine-readable author provided. Ranveig assumed (based on copyright claims). · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Upon maturity, these transgenic lines were fertile”

✓ located verbatim in the source · abstract, characters 1547–1597 · show in text ↑
t0

“indica rice”

✓ located verbatim in the source · title, characters 78–89 · show in text ↑

in vitro · yield · Oryza sativa (rice)Positive and negative results

60 papers: 51 positive, 9 negative or no effect

50 papers in the same direction as this paper · 7 in the opposite direction · 2 reporting no difference from an alternative

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  2. negative
  3. negative

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.