Paper · 2005 · Journal of Virology

Interaction between Brome Mosaic Virus Proteins and RNAs: Effects on RNA Replication, Protein Expression, and RNA Stability

K. Gopinath; B. Dragnea; C. Kao

11
claims
25
verbatim quotes
46
citations
3
research areas
✓
Open access

Abstract

Brome mosaic virus (BMV) RNA replication has been examined in a number of systems, including Saccharomyces cerevisiae. We developed an efficient T-DNA-based gene delivery system using Agrobacterium tumefaciens to transiently express BMV RNAs in Nicotiana benthamiana. The expressed RNAs can systemically infect plants and provide material to extract BMV replicase that can perform template-dependent RNA-dependent RNA synthesis in vitro. We also expressed the four BMV-encoded proteins from nonreplicating RNAs and analyzed their effects on BMV RNA accumulation. The capsid protein that coinfiltrated with constructs expressing RNA1 and RNA2 suppressed minus-strand levels but increased plus-strand RNA accumulation. The replication proteins 1a and 2a could function in trans to replicate and transcribe the BMV RNAs. None of the BMV proteins or RNA could efficiently suppress posttranscriptional silencing. However, 1a expressed in trans will suppress the production of a recombinant green fluorescent protein expressed from the nontranslated portions of BMV RNA1 and RNA2, suggesting that 1a may regulate translation from BMV RNAs. BMV replicase proteins 1a did not affect the accumulation of the BMV RNAs in the absence of RNA replication, unlike the situation reported for S. cerevisiae. This work demonstrates that the Agrobacterium-mediated gene delivery system can be used to study the cis- and trans-acting requirements for BMV RNA replication in plants and that significant differences can exist for BMV RNA replication in different hosts.

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Claims 11

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Expressed BMV RNAs systemically infected plants.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Outcome
systemically infect plantse0

Not reportedInteractor

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The expressed RNAs can systemically infect plants”

✓ located verbatim in the source · abstract, characters 268–317 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The delivered RNAs yielded BMV replicase capable of template-dependent RNA synthesis in vitro.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
Brome Mosaic VirusBrome mosaic virust0pathogen
Outcome
template-dependent RNA-dependent RNA synthesise0
Value
in vitroe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“provide material to extract BMV replicase that can perform template-dependent RNA-dependent RNA synthesis in vitro”

✓ located verbatim in the source · abstract, characters 322–436 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
t0

“Brome Mosaic Virus”

✓ located verbatim in the source · title, characters 20–38 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Capsid protein suppressed BMV minus-strand levels.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Treatment
capsid protein that coinfiltrated with constructs expressing RNA1 and RNA2e0
Interactor
Brome Mosaic VirusBrome mosaic virust0pathogen
Gene
capsid proteine0
Outcome
minus-strand levelse0
Direction
suppressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The capsid protein that coinfiltrated with constructs expressing RNA1 and RNA2 suppressed minus-strand levels”

✓ located verbatim in the source · abstract, characters 563–672 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
t0

“Brome Mosaic Virus”

✓ located verbatim in the source · title, characters 20–38 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Capsid protein increased BMV plus-strand RNA accumulation.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Treatment
capsid protein that coinfiltrated with constructs expressing RNA1 and RNA2e0
Interactor
Brome Mosaic VirusBrome mosaic virust0pathogen
Gene
capsid proteine0
Outcome
plus-strand RNA accumulatione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The capsid protein that coinfiltrated with constructs expressing RNA1 and RNA2 suppressed minus-strand levels but increased plus-strand RNA accumulation”

✓ located verbatim in the source · abstract, characters 563–715 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
t0

“Brome Mosaic Virus”

✓ located verbatim in the source · title, characters 20–38 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Replication proteins 1a and 2a functioned in trans to replicate and transcribe BMV RNAs.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
BMVBrome mosaic viruse0pathogen
Gene
replication proteins 1a and 2ae0
Outcome
replicate and transcribe the BMV RNAse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The replication proteins 1a and 2a could function in trans to replicate and transcribe the BMV RNAs”

✓ located verbatim in the source · abstract, characters 717–816 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

No BMV protein or RNA efficiently suppressed posttranscriptional silencing.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
BMVBrome mosaic viruse0pathogen
Outcome
suppress posttranscriptional silencinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“None of the BMV proteins or RNA could efficiently suppress posttranscriptional silencing”

✓ located verbatim in the source · abstract, characters 818–906 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Trans-expressed 1a suppressed recombinant green fluorescent protein production from BMV RNA nontranslated regions.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Treatment
1a expressed in transe0
Interactor
BMVBrome mosaic viruse0pathogen
Gene
1ae0
Outcome
production of a recombinant green fluorescent proteine0
Direction
suppresse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“1a expressed in trans will suppress the production of a recombinant green fluorescent protein expressed from the nontranslated portions of BMV RNA1 and RNA2”

✓ located verbatim in the source · abstract, characters 917–1073 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

BMV 1a may regulate translation from BMV RNAs.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
BMVBrome mosaic viruse0pathogen
Gene
1ae0
Outcome
translation from BMV RNAse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“suggesting that 1a may regulate translation from BMV RNAs”

✓ located verbatim in the source · abstract, characters 1075–1132 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

BMV replicase 1a did not affect BMV RNA accumulation without RNA replication.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Treatment
BMV replicase proteins 1ae0
Interactor
BMVBrome mosaic viruse0pathogen
Gene
BMV replicase proteins 1ae0
Outcome
accumulation of the BMV RNAse0
Direction
did not affecte0
Qualifier
in the absence of RNA replicatione0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“BMV replicase proteins 1a did not affect the accumulation of the BMV RNAs in the absence of RNA replication”

✓ located verbatim in the source · abstract, characters 1134–1241 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
Method / resourceobservedoriginal resultpositivemeasured

Claim · model-written summary

The Agrobacterium delivery system can study cis- and trans-acting requirements of BMV replication in plants.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
BMVBrome mosaic viruse0pathogen
Outcome
study the cis- and trans-acting requirements for BMV RNA replicatione0
Value
in plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the Agrobacterium-mediated gene delivery system can be used to study the cis- and trans-acting requirements for BMV RNA replication in plants”

✓ located verbatim in the source · abstract, characters 1320–1461 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑
Observationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

BMV RNA replication can differ significantly among hosts.

Taxon
Nicotiana benthamianaNicotiana benthamianae1
Interactor
BMVBrome mosaic viruse0pathogen
Outcome
BMV RNA replicatione0
Direction
differencese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Brome mosaic virus
Brome mosaic virus · InteractorNikolai Nikitin, Ekaterina Trifonova, Evgeniy Evtushenko, Mikhail Kirpichnikov, Joseph Atabekov, and Olga Karpova · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

e0

“significant differences can exist for BMV RNA replication in different hosts”

✓ located verbatim in the source · abstract, characters 1471–1547 · show in text ↑
e1

“in Nicotiana benthamiana”

✓ located verbatim in the source · abstract, characters 242–266 · show in text ↑

bromine atom · Brome mosaic virus · Nicotiana benthamianaResults agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. negative
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.