Paper · 2004 · Molecular Plant-Microbe Interactions

The Transcriptome of Rhizobacteria-Induced Systemic Resistance in Arabidopsis

Bas W. M. Verhagen; Jane Glazebrook; Tong Zhu; et al.

5
claims
10
verbatim quotes
519
citations
2
research areas
✓
Open access · cc-by-sa

Abstract

Plants develop an enhanced defensive capacity against a broad spectrum of plant pathogens after colonization of the roots by selected strains of nonpathogenic, fluorescent Pseudomonas spp. In Arabidopsis thaliana, this rhizobacteria-induced systemic resistance (ISR) functions independently of salicylic acid but requires responsiveness to the plant hormones jasmonic acid and ethylene. In contrast to pathogen-induced systemic acquired resistance, rhizobacteria-mediated ISR is not associated with changes in the expression of genes encoding pathogenesis-related proteins. To identify ISR-related genes, we surveyed the transcriptional response of over 8,000 Arabidopsis genes during rhizobacteria-mediated ISR. Locally in the roots, ISR-inducing Pseudomonas fluorescens WCS417r bacteria elicited a substantial change in the expression of 97 genes. However, systemically in the leaves, none of the approximately 8,000 genes tested showed a consistent change in expression in response to effective colonization of the roots by WCS417r, indicating that the onset of ISR in the leaves is not associated with detectable changes in gene expression. After challenge inoculation of WCS417r-induced plants with the bacterial leaf pathogen P. syringae pv. tomato DC3000, 81 genes showed an augmented expression pattern in ISR-expressing leaves, suggesting that these genes were primed to respond faster or more strongly upon pathogen attack. The majority of the primed genes was predicted to be regulated by jasmonic acid or ethylene signaling. Priming of pathogen-induced genes allows the plant to react more effectively to the invader encountered, which might explain the broad-spectrum action of rhizobacteria-mediated ISR.

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Claims 5

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Pseudomonas WCS417r altered expression of 97 root genes.

Taxon
ArabidopsisArabidopsist0
Organ / stage
rootse0
Treatment
Pseudomonas fluorescens WCS417r bacteriae0
Interactor
Pseudomonas fluorescens WCS417rPseudomonas fluorescense0symbiont
Outcome
expression of 97 genese0
Direction
changee0
Value
97 genese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · InteractorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Locally in the roots, ISR-inducing Pseudomonas fluorescens WCS417r bacteria elicited a substantial change in the expression of 97 genes.”

✓ located verbatim in the source · abstract, characters 713–849 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

No tested leaf gene consistently changed after root colonization.

Taxon
ArabidopsisArabidopsist0
Treatment
colonization of the roots by WCS417re0
Interactor
WCS417re0symbiont
Outcome
change in expressione0
Direction
nonee0
Value
approximately 8,000 genese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“none of the approximately 8,000 genes tested showed a consistent change in expression in response to effective colonization of the roots by WCS417r”

✓ located verbatim in the source · abstract, characters 887–1034 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

After pathogen challenge, 81 genes had augmented expression in induced leaves.

Taxon
ArabidopsisArabidopsist0
Treatment
challenge inoculatione0
Interactor
P. syringae pv. tomato DC3000Pseudomonas syringae pv. tomatoe0pathogen
Second interactor
WCS417re0symbiont
Outcome
expression patterne0
Direction
augmentede0
Value
81 genese0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Pseudomonas syringae pv. tomato
Pseudomonas syringae pv. tomato · InteractorHoward F. Schwartz · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“After challenge inoculation of WCS417r-induced plants with the bacterial leaf pathogen P. syringae pv. tomato DC3000, 81 genes showed an augmented expression pattern in ISR-expressing leaves”

✓ located verbatim in the source · abstract, characters 1145–1335 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

Most primed genes were predicted to be regulated by jasmonic acid or ethylene signaling.

Taxon
ArabidopsisArabidopsist0
Compound
jasmonic acid or ethylenee0
Outcome
primed genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“The majority of the primed genes was predicted to be regulated by jasmonic acid or ethylene signaling.”

✓ located verbatim in the source · abstract, characters 1434–1536 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Priming of pathogen induced genes may explain broad spectrum rhizobacteria induced resistance.

Taxon
ArabidopsisArabidopsist0
Outcome
broad-spectrum action of rhizobacteria-mediated ISRe0
Qualifier
Priming of pathogen-induced genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Priming of pathogen-induced genes allows the plant to react more effectively to the invader encountered, which might explain the broad-spectrum action of rhizobacteria-mediated ISR.”

✓ located verbatim in the source · abstract, characters 1537–1718 · show in text ↑
t0

“Arabidopsis”

✓ located verbatim in the source · title, characters 66–77 · show in text ↑

infection · molecular: expression · ArabidopsisPositive and negative results

28 papers: 19 positive, 9 negative or no effect

8 papers in the same direction as this paper · 19 in the opposite direction

  1. positive
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