Paper · 2006 · Journal of Experimental Botany

Cloning and characterization of Arabidopsis and Brassica juncea flavin-containing amine oxidases

Tze Soo Lim; Thiruvetipuram Rajam Chitra; Ping Han; et al.

7
claims
15
verbatim quotes
21
citations
3
research areas
✓
Open access

Abstract

Polyamines (PAs) are low molecular weight metabolites involved in various physiological and developmental processes in eukaryotic and prokaryotic cells. The cellular PA level is regulated in part by the action of amine oxidases (AOs) including copper diamine oxidases (DAOs) and flavoprotein polyamine oxidases (PAOs). In this study, the isolation and characterization of flavin amine oxidases (FAOs) from Brassica juncea (BJFAO) and Arabidopsis (ATFAO1) are reported that were clustered in the same group as polyamine oxidases from maize (MPAO) and barley (BPAO1) and monoamine oxidases from mammalian species. ATFAO1 was temporally and spatially regulated in Arabidopsis and showed distinct expression patterns in response to different stress treatments. To investigate the in vivo function of FAO, transgenic Arabidopsis plants expressing sense, antisense, and double-stranded BJFAO RNAs were generated and those with altered activity of FAOs were selected for further characterization. It was found that the shoot regeneration response in transgenic plants was significantly affected by the modulated PA levels corresponding to FAO activities. Tissues that originated from transgenic plants with down-regulated FAO activity were highly regenerative, while those from transgenic plants with upregulated FAO activity were poorly regenerative. The shoot regeneration capacity in these transgenic plants was related to the levels of individual PAs, suggesting that FAO affects shoot regeneration by regulating cellular PAs. Furthermore, it was found that the effect of FAO activity on shoot regeneration was exerted downstream of the Enhancer of Shoot Regeneration (ESR1) gene, which may function in a branch of the cytokinin signalling pathway.

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Claims 7

Associationobservedoriginal resultmeasured

Claim · model-written summary

Tissues from transgenic plants with down-regulated FAO activity were highly regenerative.

Taxon
ArabidopsisArabidopsist0
Treatment
down-regulated FAO activitye2
Outcome
shoot regeneration responsee1
Direction
highly regenerativee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Cloning and characterization of Arabidopsis and Brassica juncea flavin-containing amine oxidases”

✓ located verbatim in the source · title, characters 0–96 · show in text ↑
e1

“shoot regeneration response”

✓ located verbatim in the source · abstract, characters 1012–1039 · show in text ↑
e2

“Tissues that originated from transgenic plants with down-regulated FAO activity were highly regenerative, while those from transgenic plants with upregulated FAO activity were poorly regenerative”

✓ located verbatim in the source · abstract, characters 1148–1343 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Tissues from transgenic plants with upregulated FAO activity were poorly regenerative.

Taxon
ArabidopsisArabidopsist0
Treatment
upregulated FAO activitye2
Outcome
shoot regeneration responsee1
Direction
poorly regenerativee2
Comparator
down-regulated FAO activitye2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Cloning and characterization of Arabidopsis and Brassica juncea flavin-containing amine oxidases”

✓ located verbatim in the source · title, characters 0–96 · show in text ↑
e1

“shoot regeneration response”

✓ located verbatim in the source · abstract, characters 1012–1039 · show in text ↑
e2

“Tissues that originated from transgenic plants with down-regulated FAO activity were highly regenerative, while those from transgenic plants with upregulated FAO activity were poorly regenerative”

✓ located verbatim in the source · abstract, characters 1148–1343 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

The shoot regeneration capacity of transgenic plants was related to the levels of individual polyamines.

Taxon
ArabidopsisArabidopsist0
Compound
PAse3
Outcome
shoot regeneration capacitye3
Direction
relatede3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Cloning and characterization of Arabidopsis and Brassica juncea flavin-containing amine oxidases”

✓ located verbatim in the source · title, characters 0–96 · show in text ↑
e3

“The shoot regeneration capacity in these transgenic plants was related to the levels of individual PAs”

✓ located verbatim in the source · abstract, characters 1345–1447 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

FAO is suggested to affect shoot regeneration by regulating cellular polyamines.

Taxon
ArabidopsisArabidopsist0
Compound
cellular PAse4
Outcome
shoot regeneratione4
Qualifier
by regulating cellular PAse4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Cloning and characterization of Arabidopsis and Brassica juncea flavin-containing amine oxidases”

✓ located verbatim in the source · title, characters 0–96 · show in text ↑
e4

“suggesting that FAO affects shoot regeneration by regulating cellular PAs”

✓ located verbatim in the source · abstract, characters 1449–1522 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The effect of FAO activity on shoot regeneration is exerted downstream of the ESR1 gene.

Taxon
ArabidopsisArabidopsist0
Gene
ESR1e5
Outcome
effect of FAO activity on shoot regeneratione5
Qualifier
downstream of the Enhancer of Shoot Regeneration (ESR1) genee5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Cloning and characterization of Arabidopsis and Brassica juncea flavin-containing amine oxidases”

✓ located verbatim in the source · title, characters 0–96 · show in text ↑
e5

“the effect of FAO activity on shoot regeneration was exerted downstream of the Enhancer of Shoot Regeneration (ESR1) gene”

✓ located verbatim in the source · abstract, characters 1555–1676 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ATFAO1 is temporally and spatially regulated in Arabidopsis and shows distinct expression patterns under different stress treatments.

Taxon
ArabidopsisArabidopsise6
Treatment
different stress treatmentse6
Gene
ATFAO1e6
Outcome
expression patternse6
Qualifier
temporally and spatially regulatede6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e6

“ATFAO1 was temporally and spatially regulated in Arabidopsis and showed distinct expression patterns in response to different stress treatments”

✓ located verbatim in the source · abstract, characters 612–755 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

BJFAO and ATFAO1 cluster in the same group as maize and barley polyamine oxidases.

Taxon
Brassica junceaBrassica junceae0
Gene
BJFAOe0
Outcome
clustered in the same groupe7
Comparator
polyamine oxidases from maize (MPAO) and barley (BPAO1)e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Brassica juncea
Brassica juncea · TaxonDalgial · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“from Brassica juncea (BJFAO) and Arabidopsis (ATFAO1)”

✓ located verbatim in the source · abstract, characters 401–454 · show in text ↑
e7

“clustered in the same group as polyamine oxidases from maize (MPAO) and barley (BPAO1)”

✓ located verbatim in the source · abstract, characters 478–564 · show in text ↑