Paper · 1994 · Genome

Pachytene pairing and metaphase I configurations in a tetraploid somatic Lycopersicon esculentum × L. peruvianum hybrid

J. Sybenga; E. Schabbink; J. van Eden; et al.

19
claims
37
verbatim quotes
21
citations
3
research areas
—
Not open access

Abstract

In the tetraploid somatic hybrid between the diploid Lycopersicon species L. esculentum (tomato) and L. peruvianum, synaptonemal complexes formed quadrivalents in 73 of the 120 sets of four chromosomes (60.8%) in 10 cells studied in detail at pachytene. Of these, 43 had one pairing partner exchange, 22 had two, and 8 had three, very close to a Poisson distribution. The points of pairing partner exchange were concentrated at the middle of the two arms. The frequency per arm corresponded with physical arm length. There was a sharp drop around the centromere, and pericentric heterochromatin had a slightly lower probability of being involved in pairing partner exchange than euchromatin. The chromosomes align before pairing and there are several points of pairing initiation, with concentrations at or near the ends and the centromere. From zygotene to late pachytene the quadrivalent frequency decreased considerably. At late pachytene it was lower than expected with the observed high frequency of pairing partner exchange. Pairing affinity between species was only slightly lower than affinity within species, in spite of considerable genetic differentiation. The frequency of recombination nodules increased from early to late zygotene and then decreased strongly to full pachytene. There is a highly significant negative correlation between percent pairing and SC length. At metaphase I the frequency of quadrivalents was 0.444, and branched quadrivalents were rare, probably caused by interference and restriction of chiasma formation to distal euchromatin. Metaphase I quadrivalent frequency is a relatively good indication of pairing affinity in this material.

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Claims 19

Observationobservedoriginal resultmeasured

Claim · model-written summary

Quadrivalents formed in 73 of 120 chromosome sets (60.8%) in 10 pachytene cells.

Taxon
L. esculentum (tomato) and L. peruvianumSolanum lycopersicumSolanum peruvianume0
Organ / stage
pachytenee0
Outcome
synaptonemal complexes formed quadrivalentse0
Value
60.8%e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“L. esculentum (tomato) and L. peruvianum, synaptonemal complexes formed quadrivalents in 73 of the 120 sets of four chromosomes (60.8%) in 10 cells studied in detail at pachytene”

✓ located verbatim in the source · abstract, characters 74–252 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Among quadrivalents, 43 had one pairing partner exchange.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
one pairing partner exchangee0
Value
43e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Of these, 43 had one pairing partner exchange, 22 had two, and 8 had three, very close to a Poisson distribution”

✓ located verbatim in the source · abstract, characters 254–366 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Among quadrivalents, 22 had two pairing partner exchanges.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
pairing partner exchangee0
Value
22e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Of these, 43 had one pairing partner exchange, 22 had two, and 8 had three, very close to a Poisson distribution”

✓ located verbatim in the source · abstract, characters 254–366 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Among quadrivalents, eight had three pairing partner exchanges.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
pairing partner exchangee0
Value
8e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Of these, 43 had one pairing partner exchange, 22 had two, and 8 had three, very close to a Poisson distribution”

✓ located verbatim in the source · abstract, characters 254–366 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pairing partner exchanges were concentrated in the middle of chromosome arms.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
points of pairing partner exchange were concentrated at the middle of the two armse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The points of pairing partner exchange were concentrated at the middle of the two arms”

✓ located verbatim in the source · abstract, characters 368–454 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Exchange frequency per arm corresponded with physical arm length.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Organ / stage
arme0
Outcome
frequency per arme0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The frequency per arm corresponded with physical arm length”

✓ located verbatim in the source · abstract, characters 456–515 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pairing partner exchange dropped sharply around the centromere.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
sharp drop around the centromeree0
Direction
drope0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“There was a sharp drop around the centromere”

✓ located verbatim in the source · abstract, characters 517–561 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Pericentric heterochromatin had slightly less exchange than euchromatin.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
probability of being involved in pairing partner exchangee0
Direction
lowere0
Comparator
euchromatine0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“pericentric heterochromatin had a slightly lower probability of being involved in pairing partner exchange than euchromatin”

✓ located verbatim in the source · abstract, characters 567–690 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Chromosomes aligned before pairing, with several initiation points concentrated near ends and centromeres.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
chromosomes align before pairing and there are several points of pairing initiatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The chromosomes align before pairing and there are several points of pairing initiation, with concentrations at or near the ends and the centromere”

✓ located verbatim in the source · abstract, characters 692–839 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Quadrivalent frequency declined considerably from zygotene to late pachytene.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
quadrivalent frequencye0
Direction
decreasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“From zygotene to late pachytene the quadrivalent frequency decreased considerably”

✓ located verbatim in the source · abstract, characters 841–922 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Late pachytene quadrivalent frequency was lower than expected from exchange frequency.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
frequency of pairing partner exchangee0
Direction
lowere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“At late pachytene it was lower than expected with the observed high frequency of pairing partner exchange”

✓ located verbatim in the source · abstract, characters 924–1029 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Between-species pairing affinity was only slightly lower than within-species affinity.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
Pairing affinity between speciese0
Direction
lowere0
Comparator
affinity within speciese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Pairing affinity between species was only slightly lower than affinity within species”

✓ located verbatim in the source · abstract, characters 1031–1116 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Recombination nodule frequency rose from early to late zygotene.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
frequency of recombination nodulese0
Direction
increasede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The frequency of recombination nodules increased from early to late zygotene and then decreased strongly to full pachytene”

✓ located verbatim in the source · abstract, characters 1168–1290 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Recombination nodule frequency fell strongly by full pachytene.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
frequency of recombination nodulese0
Direction
decreased stronglye0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The frequency of recombination nodules increased from early to late zygotene and then decreased strongly to full pachytene”

✓ located verbatim in the source · abstract, characters 1168–1290 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Associationobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

Percent pairing and synaptonemal complex length were strongly negatively correlated.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Organ / stage
SCe0
Outcome
percent pairinge0
Direction
negative correlatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“There is a highly significant negative correlation between percent pairing and SC length”

✓ located verbatim in the source · abstract, characters 1292–1380 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Metaphase I quadrivalent frequency was 0.444.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
frequency of quadrivalentse0
Value
0.444e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“At metaphase I the frequency of quadrivalents was 0.444”

✓ located verbatim in the source · abstract, characters 1382–1437 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Branched quadrivalents were rare at metaphase I.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
branched quadrivalents were raree0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“branched quadrivalents were rare”

✓ located verbatim in the source · abstract, characters 1443–1475 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors suggest interference and distal chiasma restriction caused rare branched quadrivalents.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
branched quadrivalents were raree0
Qualifier
interference and restriction of chiasma formation to distal euchromatine0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“branched quadrivalents were rare, probably caused by interference and restriction of chiasma formation to distal euchromatin”

✓ located verbatim in the source · abstract, characters 1443–1567 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑
Method / resourceauthor interpretationoriginal resultmeasured

Claim · model-written summary

Metaphase I quadrivalent frequency relatively well indicates pairing affinity.

Taxon
Lycopersicon esculentum × L. peruvianumSolanum lycopersicumt0
Outcome
indication of pairing affinitye0
Comparator
pairing affinitye0

Not reportedValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Metaphase I quadrivalent frequency is a relatively good indication of pairing affinity in this material”

✓ located verbatim in the source · abstract, characters 1569–1672 · show in text ↑
t0

“Lycopersicon esculentum × L. peruvianum hybrid”

✓ located verbatim in the source · title, characters 73–119 · show in text ↑