Paper · 2016 · Plant Biotechnology Journal

The OsmiR396c‐OsGRF4‐OsGIF1 regulatory module determines grain size and yield in rice

Shuangcheng Li; Fengyan Gao; Kailong Xie; et al.

8
claims
16
verbatim quotes
337
citations
3
research areas
✓
Open access · cc-by

Abstract

Grain weight is the most important component of rice yield and is mainly determined by grain size, which is generally controlled by quantitative trait loci (QTLs). Although numerous QTLs that regulate grain weight have been identified, the genetic network that controls grain size remains unclear. Herein, we report the cloning and functional analysis of a dominant QTL, grain length and width 2 (GLW2), which positively regulates grain weight by simultaneously increasing grain length and width. The GLW2 locus encodes OsGRF4 (growth-regulating factor 4) and is regulated by the microRNA miR396c in vivo. The mutation in OsGRF4 perturbs the OsmiR396 target regulation of OsGRF4, generating a larger grain size and enhanced grain yield. We also demonstrate that OsGIF1 (GRF-interacting factors 1) directly interacts with OsGRF4, and increasing its expression improves grain size. Our results suggest that the miR396c-OsGRF4-OsGIF1 regulatory module plays an important role in grain size determination and holds implications for rice yield improvement.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

GLW2 positively regulates grain weight by increasing grain length and width in rice.

Gene
GLW2e1
Outcome
grain weighte1
Direction
positively regulatese1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“determines grain size and yield in rice”

✓ located verbatim in the source · title, characters 46–85 · show in text ↑
e1

“a dominant QTL, grain length and width 2 (GLW2), which positively regulates grain weight by simultaneously increasing grain length and width”

✓ located verbatim in the source · abstract, characters 355–495 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The GLW2 locus encodes OsGRF4 in rice.

Gene
OsGRF4e2
Outcome
GLW2 locus encodes OsGRF4e2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“determines grain size and yield in rice”

✓ located verbatim in the source · title, characters 46–85 · show in text ↑
e2

“The GLW2 locus encodes OsGRF4 (growth-regulating factor 4) and is regulated by the microRNA miR396c in vivo”

✓ located verbatim in the source · abstract, characters 497–604 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The GLW2 locus is regulated by the microRNA miR396c in vivo.

Gene
GLW2e2
Outcome
is regulated by the microRNA miR396c in vivoe2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“determines grain size and yield in rice”

✓ located verbatim in the source · title, characters 46–85 · show in text ↑
e2

“The GLW2 locus encodes OsGRF4 (growth-regulating factor 4) and is regulated by the microRNA miR396c in vivo”

✓ located verbatim in the source · abstract, characters 497–604 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The mutation in OsGRF4 generated a larger grain size in rice.

Treatment
The mutation in OsGRF4e3
Gene
OsGRF4e3
Outcome
grain sizee3
Direction
largere3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“determines grain size and yield in rice”

✓ located verbatim in the source · title, characters 46–85 · show in text ↑
e3

“The mutation in OsGRF4 perturbs the OsmiR396 target regulation of OsGRF4, generating a larger grain size and enhanced grain yield”

✓ located verbatim in the source · abstract, characters 606–735 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

The mutation in OsGRF4 enhanced grain yield in rice.

Treatment
The mutation in OsGRF4e3
Gene
OsGRF4e3
Outcome
grain yielde3
Direction
enhancede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“determines grain size and yield in rice”

✓ located verbatim in the source · title, characters 46–85 · show in text ↑
e3

“The mutation in OsGRF4 perturbs the OsmiR396 target regulation of OsGRF4, generating a larger grain size and enhanced grain yield”

✓ located verbatim in the source · abstract, characters 606–735 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

OsGIF1 directly interacts with OsGRF4.

Gene
OsGIF1e4
Outcome
directly interacts with OsGRF4e4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“determines grain size and yield in rice”

✓ located verbatim in the source · title, characters 46–85 · show in text ↑
e4

“We also demonstrate that OsGIF1 (GRF-interacting factors 1) directly interacts with OsGRF4, and increasing its expression improves grain size”

✓ located verbatim in the source · abstract, characters 737–878 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Increasing the expression of OsGIF1 improved grain size in rice.

Treatment
increasing its expressione4
Gene
OsGIF1e4
Outcome
grain sizee4
Direction
improvese4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“determines grain size and yield in rice”

✓ located verbatim in the source · title, characters 46–85 · show in text ↑
e4

“We also demonstrate that OsGIF1 (GRF-interacting factors 1) directly interacts with OsGRF4, and increasing its expression improves grain size”

✓ located verbatim in the source · abstract, characters 737–878 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

The miR396c-OsGRF4-OsGIF1 regulatory module plays an important role in grain size determination in rice.

Gene
miR396c-OsGRF4-OsGIF1e5
Outcome
grain size determinatione5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“determines grain size and yield in rice”

✓ located verbatim in the source · title, characters 46–85 · show in text ↑
e5

“Our results suggest that the miR396c-OsGRF4-OsGIF1 regulatory module plays an important role in grain size determination”

✓ located verbatim in the source · abstract, characters 880–1000 · show in text ↑

loss of function · yield · Oryza sativa (rice)Positive and negative results

134 papers: 62 positive, 72 negative or no effect

61 papers in the same direction as this paper · 72 in the opposite direction

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.