Paper · 2011 · ACTA AGRONOMICA SINICA

Cloning and Functional Analysis of Viviparous-1 Promoter in Wheat

Sun Yong

9
claims
16
verbatim quotes
0
citations
1
research areas
—
Not open access

Abstract

Viviparous1 (Vp1) plays an important role in regulating embryo development, seed dormancy, and germination in higher plants. Although we previously demonstrated a close correlation between Vp1B allelic variation and the different levels of tolerance to pre-harvest sprouting (PHS) in common wheat, little is known about the potential cis-elements in Vp1B promoter region, which may be involved in the control of PHS by Vp1B. In this study, a 2 232 bp Vp1B upstream sequence was isolated. In silico analysis revealed the presence of nine ABRE, two DREB, six MYB, three GARE, one TCA-E, two TGACG-motif, four SKn-1, and one RYREPE cis-elements in the isolated sequence. Based on this, we constructed various plasmid vectors with 5′-truncated Vp1B promoters fused with the GUS (encoding β-glucuronidase) reporter gene. Transient expression assay in wheat callus indicated that Vp1B promoter activity was inducible by low-temperature, ABA, or GA treatment. However, the level of induced GUS activity declined as promoter length decreased. Subsequently, six truncated promoter reporter fusions were introduced into the genome of durum wheat by Agrobacterium-mediated transformation and stable transgenic lines were obtained. Analysis of the transgenic lines indicated that Vp1B promoter could drive GUS expression in the anther, axis, aleurone and root, but not in the leaves, stems and nodes. However, in the plants with the transgenic Vp1B promoter fragment longer than 660 bp, GUS expression could be induced in the nodes by ABA treatment.

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

A 2 232 bp Vp1B upstream sequence was isolated.

Gene
Vp1Be0
Outcome
upstream sequencee0
Value
2 232 bpe0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“a 2 232 bp Vp1B upstream sequence was isolated”

✓ located verbatim in the source · abstract, characters 440–486 · show in text ↑
t0

“Wheat”

✓ located verbatim in the source · title, characters 60–65 · show in text ↑
Observationobservedoriginal resultsimulated

Claim · model-written summary

In silico analysis identified nine ABRE, two DREB, six MYB, three GARE, one TCA-E, two TGACG-motif, four SKn-1, and one RYREPE elements.

Gene
ABRE, two DREB, six MYB, three GARE, one TCA-E, two TGACG-motif, four SKn-1, and one RYREPEe0
Outcome
cis-elementse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In silico analysis revealed the presence of nine ABRE, two DREB, six MYB, three GARE, one TCA-E, two TGACG-motif, four SKn-1, and one RYREPE cis-elements in the isolated sequence”

✓ located verbatim in the source · abstract, characters 488–666 · show in text ↑
t0

“Wheat”

✓ located verbatim in the source · title, characters 60–65 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Low temperature induced Vp1B promoter activity in wheat callus.

Organ / stage
calluse0
Treatment
low-temperaturee0
Gene
Vp1Be0
Outcome
promoter activitye0
Direction
induciblee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Transient expression assay in wheat callus indicated that Vp1B promoter activity was inducible by low-temperature, ABA, or GA treatment”

✓ located verbatim in the source · abstract, characters 816–951 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ABA induced Vp1B promoter activity in wheat callus.

Organ / stage
calluse0
Treatment
ABAe0
Gene
Vp1Be0
Outcome
promoter activitye0
Direction
induciblee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Transient expression assay in wheat callus indicated that Vp1B promoter activity was inducible by low-temperature, ABA, or GA treatment”

✓ located verbatim in the source · abstract, characters 816–951 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

GA induced Vp1B promoter activity in wheat callus.

Organ / stage
calluse0
Treatment
GAe0
Gene
Vp1Be0
Outcome
promoter activitye0
Direction
induciblee0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Transient expression assay in wheat callus indicated that Vp1B promoter activity was inducible by low-temperature, ABA, or GA treatment”

✓ located verbatim in the source · abstract, characters 816–951 · show in text ↑
Associationobservedoriginal resultnegativemeasured

Claim · model-written summary

Induced GUS activity declined with shorter Vp1B promoters.

Material
promotere0
Gene
GUSe0
Outcome
induced GUS activitye0
Direction
declinede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“the level of induced GUS activity declined as promoter length decreased”

✓ located verbatim in the source · abstract, characters 962–1033 · show in text ↑
t0

“Wheat”

✓ located verbatim in the source · title, characters 60–65 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Vp1B promoter drove GUS expression in anther, axis, aleurone, and root.

Organ / stage
anther, axis, aleurone and roote0
Gene
Vp1Be0
Outcome
GUS expressione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“Vp1B promoter could drive GUS expression in the anther, axis, aleurone and root”

✓ located verbatim in the source · abstract, characters 1268–1347 · show in text ↑
t0

“Wheat”

✓ located verbatim in the source · title, characters 60–65 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

Vp1B promoter did not drive GUS expression in leaves, stems, and nodes.

Organ / stage
leaves, stems and nodese0
Gene
Vp1Be1
Outcome
GUS expressione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“but not in the leaves, stems and nodes”

✓ located verbatim in the source · abstract, characters 1349–1387 · show in text ↑
t0

“Wheat”

✓ located verbatim in the source · title, characters 60–65 · show in text ↑
e1

“Vp1B promoter could drive GUS expression in the anther, axis, aleurone and root”

✓ located verbatim in the source · abstract, characters 1268–1347 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

ABA induced nodal GUS expression in plants with a Vp1B promoter fragment longer than 660 bp.

Organ / stage
nodese0
Treatment
ABA treatmente0
Gene
Vp1Be0
Outcome
GUS expressione0
Direction
inducede0
Qualifier
longer than 660 bpe0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“in the plants with the transgenic Vp1B promoter fragment longer than 660 bp, GUS expression could be induced in the nodes by ABA treatment”

✓ located verbatim in the source · abstract, characters 1398–1536 · show in text ↑
t0

“Wheat”

✓ located verbatim in the source · title, characters 60–65 · show in text ↑

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49 papers: 34 positive, 15 negative or no effect

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.