Paper · 2016 · Crop and Pasture Science

NB-LRR gene family required for Rsc4-mediated resistance to Soybean mosaic virus

Na Li; Jin Long Yin; Cui Li; et al.

4
claims
9
verbatim quotes
19
citations
2
research areas
—
Not open access

Abstract

Soybean mosaic virus (SMV) causes one of the most destructive viral diseases in soybean (Glycine max). The soybean cultivar Dabaima carries the Rsc4 gene for SMV resistance. The genomic region containing Rsc4 was previously localised within a 100-kb region on chromosome 14. The corresponding region contains three complete nucleotide-binding site (NB) and leucine-rich repeat (LRR) type genes and one incomplete gene that is likely non-functional. Quantitative real-time polymerase chain reaction analysis revealed that three candidate genes encoding NB-LRR proteins were differentially expressed in resistant and susceptible lines when the plants were inoculated with SMV strain SC4. To test the involvement of the three candidate genes in Rsc4 mediated resistance, the three genes were silenced using a Bean pod mottle virus (BPMV)-based vector construct. Silencing of three candidate genes attenuated the Rsc4-mediated resistance and induced SMV symptoms in Dabaima plants. Moreover, Rsc4 candidate genes were 78% downregulated when compared with the empty BPMV vector-treated plants. From these results, we concluded that at least one of the three candidate genes encoding NB-LRR proteins is required for Rsc4 resistance to SMV.

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Claims 4

Observationobservedoriginal resultmeasured

Claim · model-written summary

Three candidate genes encoding NB-LRR proteins were differentially expressed in resistant and susceptible soybean lines inoculated with SMV strain SC4.

Taxon
soybeanGlycine maxe0
Material
resistant and susceptible linese1
Interactor
SMV strain SC4e1pathogen
Gene
NB-LRR proteinse1
Outcome
three candidate genes encoding NB-LRR proteinse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Soybean mosaic virus (SMV) causes one of the most destructive viral diseases in soybean (Glycine max)”

✓ located verbatim in the source · abstract, characters 0–101 · show in text ↑
e1

“Quantitative real-time polymerase chain reaction analysis revealed that three candidate genes encoding NB-LRR proteins were differentially expressed in resistant and susceptible lines when the plants were inoculated with SMV strain SC4”

✓ located verbatim in the source · abstract, characters 449–684 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Silencing of three candidate genes attenuated Rsc4-mediated resistance and induced SMV symptoms in Dabaima soybean plants.

Taxon
soybeanGlycine maxe0
Material
Dabaimae1
Treatment
Silencing of three candidate genese1
Interactor
SMVe1pathogen
Gene
Rsc4e1
Outcome
Rsc4-mediated resistancee1
Direction
attenuatede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Soybean mosaic virus (SMV) causes one of the most destructive viral diseases in soybean (Glycine max)”

✓ located verbatim in the source · abstract, characters 0–101 · show in text ↑
e1

“Silencing of three candidate genes attenuated the Rsc4-mediated resistance and induced SMV symptoms in Dabaima plants”

✓ located verbatim in the source · abstract, characters 859–976 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Silencing with a BPMV-based vector downregulated Rsc4 candidate genes by 78% compared with the empty vector.

Taxon
soybeanGlycine maxe0
Treatment
silenced using a Bean pod mottle virus (BPMV)-based vector constructe1
Outcome
Rsc4 candidate genese2
Direction
downregulatede2
Value
78%e2
Comparator
empty BPMV vector-treated plantse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Soybean mosaic virus (SMV) causes one of the most destructive viral diseases in soybean (Glycine max)”

✓ located verbatim in the source · abstract, characters 0–101 · show in text ↑
e1

“the three genes were silenced using a Bean pod mottle virus (BPMV)-based vector construct”

✓ located verbatim in the source · abstract, characters 768–857 · show in text ↑
e2

“Moreover, Rsc4 candidate genes were 78% downregulated when compared with the empty BPMV vector-treated plants”

✓ located verbatim in the source · abstract, characters 978–1087 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

At least one of the three NB-LRR candidate genes is required for Rsc4 resistance to SMV in soybean.

Taxon
soybeanGlycine maxe0
Interactor
SMVe1pathogen
Gene
NB-LRR proteinse1
Outcome
Rsc4 resistance to SMVe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“Soybean mosaic virus (SMV) causes one of the most destructive viral diseases in soybean (Glycine max)”

✓ located verbatim in the source · abstract, characters 0–101 · show in text ↑
e1

“we concluded that at least one of the three candidate genes encoding NB-LRR proteins is required for Rsc4 resistance to SMV”

✓ located verbatim in the source · abstract, characters 1109–1232 · show in text ↑

loss of function · disease · Glycine max (soybean)Positive and negative results

37 papers: 17 positive, 20 negative or no effect

19 papers in the same direction as this paper · 17 in the opposite direction

  1. negative
  2. positive
  3. positive

33 papers more in this group

See all 37 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.