Paper · 2016 · BMC Microbiology

Isolation, identification and characterization of Paenibacillus polymyxa CR1 with potentials for biopesticide, biofertilization, biomass degradation and biofuel production

Brian Weselowski; Naeem Nathoo; Alexander William Eastman; et al.

7
claims
8
verbatim quotes
185
citations
2
research areas
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Open access · cc-by

Abstract

BACKGROUND: Paenibacillus polymyxa is a plant-growth promoting rhizobacterium that could be exploited as an environmentally friendlier alternative to chemical fertilizers and pesticides. Various strains have been isolated that can benefit agriculture through antimicrobial activity, nitrogen fixation, phosphate solubilization, plant hormone production, or lignocellulose degradation. However, no single strain has yet been identified in which all of these advantageous traits have been confirmed. RESULTS: P. polymyxa CR1 was isolated from degrading corn roots from southern Ontario, Canada. It was shown to possess in vitro antagonistic activities against the common plant pathogens Phytophthora sojae P6497 (oomycete), Rhizoctonia solani 1809 (basidiomycete fungus), Cylindrocarpon destructans 2062 (ascomycete fungus), Pseudomonas syringae DC3000 (bacterium), and Xanthomonas campestris 93-1 (bacterium), as well as Bacillus cereus (bacterium), an agent of food-borne illness. P. polymyxa CR1 enhanced growth of maize, potato, cucumber, Arabidopsis, and tomato plants; utilized atmospheric nitrogen and insoluble phosphorus; produced the phytohormone indole-3-acetic acid (IAA); and degraded and utilized the major components of lignocellulose (lignin, cellulose, and hemicellulose). CONCLUSIONS: P. polymyxa CR1 has multiple beneficial traits that are relevant to sustainable agriculture and the bio-economy. This strain could be developed for field application in order to control pathogens, promote plant growth, and degrade crop residues after harvest.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

P. polymyxa CR1 was isolated from degrading corn roots.

Organ / stage
rootse0
Interactor
P. polymyxa CR1Paenibacillus polymyxae0symbiont
Outcome
P. polymyxa CR1 was isolatede0
Setting
southern Ontario, Canadae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays subsp. mays
Zea mays subsp. mays · TaxonDominicus Johannes Bergsma · CC BY-SA 4.0 · Wikimedia Commons ↗
Paenibacillus polymyxa
Paenibacillus polymyxa · InteractorDr. W.A. Clark · Public domain · Wikimedia Commons ↗

Verbatim

e0

“P. polymyxa CR1 was isolated from degrading corn roots from southern Ontario, Canada”

✓ located verbatim in the source · abstract, characters 507–591 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

P. polymyxa CR1 antagonized Phytophthora sojae P6497 in vitro.

Interactor
Phytophthora sojae P6497Phytophthora sojaee0pathogen
Second interactor
P. polymyxa CR1Paenibacillus polymyxat0biocontrol_agent
Outcome
antagonistic activities against the common plant pathogens Phytophthora sojae P6497e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays subsp. mays
Zea mays subsp. mays · TaxonDominicus Johannes Bergsma · CC BY-SA 4.0 · Wikimedia Commons ↗
Paenibacillus polymyxa
Paenibacillus polymyxa · Second interactorDr. W.A. Clark · Public domain · Wikimedia Commons ↗

Verbatim

e0

“in vitro antagonistic activities against the common plant pathogens Phytophthora sojae P6497 (oomycete), Rhizoctonia solani 1809 (basidiomycete fungus), Cylindrocarpon destructans 2062 (ascomycete fungus), Pseudomonas syringae DC3000 (bacterium), and Xanthomonas campestris 93-1 (bacterium)”

✓ located verbatim in the source · abstract, characters 617–907 · show in text ↑
t0

“P. polymyxa CR1 was isolated from degrading corn roots”

✓ located verbatim in the source · abstract, characters 507–561 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

P. polymyxa CR1 enhanced maize growth.

Taxon
maizeZea mayse0
Treatment
P. polymyxa CR1e0
Interactor
P. polymyxa CR1Paenibacillus polymyxae0symbiont
Outcome
growthe0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Zea mays
Zea mays · TaxonAkwugo · CC BY-SA 4.0 · Wikimedia Commons ↗
Paenibacillus polymyxa
Paenibacillus polymyxa · InteractorDr. W.A. Clark · Public domain · Wikimedia Commons ↗

Verbatim

e0

“P. polymyxa CR1 enhanced growth of maize, potato, cucumber, Arabidopsis, and tomato plants”

✓ located verbatim in the source · abstract, characters 981–1071 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

P. polymyxa CR1 enhanced potato growth.

Treatment
P. polymyxa CR1e0
Interactor
P. polymyxa CR1Paenibacillus polymyxae0symbiont
Outcome
growthe0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum tuberosum
Solanum tuberosum · TaxonScott Bauer, USDA ARS · Public domain · Wikimedia Commons ↗
Paenibacillus polymyxa
Paenibacillus polymyxa · InteractorDr. W.A. Clark · Public domain · Wikimedia Commons ↗

Verbatim

e0

“P. polymyxa CR1 enhanced growth of maize, potato, cucumber, Arabidopsis, and tomato plants”

✓ located verbatim in the source · abstract, characters 981–1071 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

P. polymyxa CR1 enhanced cucumber growth.

Taxon
cucumberCucumis sativuse0
Treatment
P. polymyxa CR1e0
Interactor
P. polymyxa CR1Paenibacillus polymyxae0symbiont
Outcome
growthe0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗
Paenibacillus polymyxa
Paenibacillus polymyxa · InteractorDr. W.A. Clark · Public domain · Wikimedia Commons ↗

Verbatim

e0

“P. polymyxa CR1 enhanced growth of maize, potato, cucumber, Arabidopsis, and tomato plants”

✓ located verbatim in the source · abstract, characters 981–1071 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

P. polymyxa CR1 enhanced Arabidopsis growth.

Taxon
ArabidopsisArabidopsise0
Treatment
P. polymyxa CR1e0
Interactor
P. polymyxa CR1Paenibacillus polymyxae0symbiont
Outcome
growthe0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Paenibacillus polymyxa
Paenibacillus polymyxa · InteractorDr. W.A. Clark · Public domain · Wikimedia Commons ↗

Verbatim

e0

“P. polymyxa CR1 enhanced growth of maize, potato, cucumber, Arabidopsis, and tomato plants”

✓ located verbatim in the source · abstract, characters 981–1071 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

P. polymyxa CR1 enhanced tomato growth.

Treatment
P. polymyxa CR1e0
Interactor
P. polymyxa CR1Paenibacillus polymyxae0symbiont
Outcome
growthe0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗
Paenibacillus polymyxa
Paenibacillus polymyxa · InteractorDr. W.A. Clark · Public domain · Wikimedia Commons ↗

Verbatim

e0

“P. polymyxa CR1 enhanced growth of maize, potato, cucumber, Arabidopsis, and tomato plants”

✓ located verbatim in the source · abstract, characters 981–1071 · show in text ↑

Paenibacillus polymyxa · growth · Cucumis sativus (cucumber)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

1 paper in the same direction as this paper · 1 in the opposite direction

  1. negative
  2. positive
See all 3 papers →

Paenibacillus polymyxa · growth · Zea mays (maize)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

Paenibacillus polymyxa · growth · Solanum lycopersicum (tomato)Results agree

4 papers: 4 positive, 0 negative or no effect

3 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive
See all 4 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.