Paper · 2017 · Applied Biochemistry and Microbiology

Intermicrobial relationships of the pea nodule symbiont Serratia sp. Ent16 and its colonization of the host endorhizosphere

S. R. Garipova; D. V. Garifullina; An. H. Baimiev; et al.

9
claims
19
verbatim quotes
5
citations
1
research areas
—
Not open access

Abstract

A strain of Serratia sp. Ent16 isolated from internal tissues of pea nodule inhibited in vitro growth of the plant pathogens Fusarium oxysporum and Bipolaris sorokiniana and the model strain Rhizobium leguminosarum bv viceae 1078 but had a considerably weaker antagonistic effect on the Rhizobium strain Rh16 from its own nodule. Cells of the Ent16 strain tagged by the gfp gene (the Ent16-gfp strain) were not seen in the pea endorhizosphere when plants were grown in a rich culture medium. The development of symbiosis was favored by plant germination on filter paper. Confocal microscopy showed that individual cells of the Ent16-gfp strain were attached to the outer side of root hair cell walls, while agglomerations of fluorescent bacterial cells were detected in the zone of exoderm of lateral root formation and in root vessels. A series of scanned sections of pea root revealed the presence of the Ent16-gfp strain in lateral root primordia, through which the bacteria penetrated the endorhizosphere.

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The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 9

Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Serratia Ent16 inhibited Fusarium oxysporum growth in vitro.

Interactor
Fusarium oxysporumFusarium oxysporume0pathogen
Second interactor
Serratia sp. Ent16e0biocontrol_agent
Outcome
growth of the plant pathogens Fusarium oxysporume0
Direction
inhibitede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗
Fusarium oxysporum
Fusarium oxysporum · InteractorClemson University - USDA Cooperative Extension Slide Series · CC BY 3.0 · Wikimedia Commons ↗

Verbatim

t0

“pea”

✓ located verbatim in the source · title, characters 36–39 · show in text ↑
e0

“A strain of Serratia sp. Ent16 isolated from internal tissues of pea nodule inhibited in vitro growth of the plant pathogens Fusarium oxysporum and Bipolaris sorokiniana”

✓ located verbatim in the source · abstract, characters 0–169 · show in text ↑
Observationobservedoriginal resultpositivemeasured

Claim · model-written summary

Serratia Ent16 inhibited Bipolaris sorokiniana growth in vitro.

Interactor
Bipolaris sorokinianaBipolaris sorokinianae0pathogen
Second interactor
Serratia sp. Ent16e0biocontrol_agent
Outcome
growth of the plant pathogens Fusarium oxysporum and Bipolaris sorokinianae0
Direction
inhibitede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗
Bipolaris sorokiniana
Bipolaris sorokiniana · InteractorJie-Hao Ou · CC BY 4.0 · iNaturalist ↗

Verbatim

t0

“pea”

✓ located verbatim in the source · title, characters 36–39 · show in text ↑
e0

“A strain of Serratia sp. Ent16 isolated from internal tissues of pea nodule inhibited in vitro growth of the plant pathogens Fusarium oxysporum and Bipolaris sorokiniana”

✓ located verbatim in the source · abstract, characters 0–169 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Serratia Ent16 inhibited Rhizobium leguminosarum bv viceae 1078.

Interactor
Rhizobium leguminosarum bv viceae 1078Rhizobium leguminosarume0symbiont
Second interactor
Serratia sp. Ent16e1other
Outcome
growth of the plant pathogens Fusarium oxysporum and Bipolaris sorokiniana and the model strain Rhizobium leguminosarum bv viceae 1078e0
Direction
inhibitede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗
Rhizobium leguminosarum
Rhizobium leguminosarum · Interactor · picture from its Wikimedia Commons categoryQaswarah 21 · CC BY 4.0 · Wikimedia Commons ↗

Verbatim

t0

“pea”

✓ located verbatim in the source · title, characters 36–39 · show in text ↑
e0

“inhibited in vitro growth of the plant pathogens Fusarium oxysporum and Bipolaris sorokiniana and the model strain Rhizobium leguminosarum bv viceae 1078”

✓ located verbatim in the source · abstract, characters 76–229 · show in text ↑
e1

“A strain of Serratia sp. Ent16”

✓ located verbatim in the source · abstract, characters 0–30 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Antagonism by Serratia Ent16 was weaker toward Rhizobium Rh16 from the same nodule.

Interactor
Rhizobium strain Rh16e0symbiont
Second interactor
Serratia sp. Ent16e1other
Outcome
antagonistic effect on the Rhizobium strain Rh16e0
Direction
weakere0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

t0

“pea”

✓ located verbatim in the source · title, characters 36–39 · show in text ↑
e0

“had a considerably weaker antagonistic effect on the Rhizobium strain Rh16 from its own nodule”

✓ located verbatim in the source · abstract, characters 234–328 · show in text ↑
e1

“A strain of Serratia sp. Ent16”

✓ located verbatim in the source · abstract, characters 0–30 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Tagged Serratia Ent16 was not seen in the pea endorhizosphere in rich culture medium.

Interactor
Ent16-gfp straine0symbiont
Gene
gfp genee0
Outcome
Ent16-gfp strain) were not seen in the pea endorhizospheree0
Setting
rich culture mediume0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“Cells of the Ent16 strain tagged by the gfp gene (the Ent16-gfp strain) were not seen in the pea endorhizosphere when plants were grown in a rich culture medium”

✓ located verbatim in the source · abstract, characters 330–490 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Germination on filter paper favored development of symbiosis.

Treatment
plant germination on filter papere0
Outcome
development of symbiosise0
Direction
favorede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

t0

“pea”

✓ located verbatim in the source · title, characters 36–39 · show in text ↑
e0

“The development of symbiosis was favored by plant germination on filter paper”

✓ located verbatim in the source · abstract, characters 492–569 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Individual tagged Ent16 cells attached to outer root-hair cell walls.

Organ / stage
root hair cell wallse0
Interactor
Ent16-gfp straine0symbiont
Outcome
attached to the outer side of root hair cell wallse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

t0

“pea”

✓ located verbatim in the source · title, characters 36–39 · show in text ↑
e0

“individual cells of the Ent16-gfp strain were attached to the outer side of root hair cell walls”

✓ located verbatim in the source · abstract, characters 603–699 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Tagged Ent16 bacterial cell aggregates were detected in the lateral-root exoderm zone and root vessels.

Organ / stage
zone of exoderm of lateral root formation and in root vesselse0
Interactor
Ent16-gfp straine1symbiont
Outcome
agglomerations of fluorescent bacterial cells were detectede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

t0

“pea”

✓ located verbatim in the source · title, characters 36–39 · show in text ↑
e0

“agglomerations of fluorescent bacterial cells were detected in the zone of exoderm of lateral root formation and in root vessels”

✓ located verbatim in the source · abstract, characters 707–835 · show in text ↑
e1

“individual cells of the Ent16-gfp strain were attached”

✓ located verbatim in the source · abstract, characters 603–657 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Tagged Ent16 was present in lateral-root primordia, providing a route into the endorhizosphere.

Organ / stage
lateral root primordiae0
Interactor
Ent16-gfp straine0symbiont
Outcome
presence of the Ent16-gfp strain in lateral root primordiae0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Lathyrus oleraceus
Lathyrus oleraceus · TaxonRenee Comet (photographer) AV Number: AV-9400-4164 · Public domain · Wikimedia Commons ↗

Verbatim

e0

“A series of scanned sections of pea root revealed the presence of the Ent16-gfp strain in lateral root primordia, through which the bacteria penetrated the endorhizosphere”

✓ located verbatim in the source · abstract, characters 837–1008 · show in text ↑

processing · growth · Lathyrus oleraceus (pea)Positive and negative results

8 papers: 5 positive, 3 negative or no effect

4 papers in the same direction as this paper · 3 in the opposite direction

  1. no effect
  2. negative
  3. negative

4 papers more in this group

See all 8 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.