Paper · 2019 · Scientific Reports

Functional conservation of EXA1 among diverse plant species for the infection by a family of plant viruses

Akira Yusa; Yutaro Neriya; Masayoshi Hashimoto; et al.

5
claims
5
verbatim quotes
21
citations
2
research areas
✓
Open access · cc-by

Abstract

Since the propagation of plant viruses depends on various host susceptibility factors, deficiency in them can prevent viral infection in cultivated and model plants. Recently, we identified the susceptibility factor Essential for poteXvirus Accumulation 1 (EXA1) in Arabidopsis thaliana, and revealed that EXA1-mediated resistance was effective against three potexviruses. Although EXA1 homolog genes are found in tomato and rice, little is known about which viruses depend on EXA1 for their infection capability and whether the function of EXA1 homologs in viral infection is conserved across multiple plant species, including crops. To address these questions, we generated knockdown mutants using virus-induced gene silencing in two Solanaceae species, Nicotiana benthamiana and tomato. In N. benthamiana, silencing of an EXA1 homolog significantly compromised the accumulation of potexviruses and a lolavirus, a close relative of potexviruses, whereas transient expression of EXA1 homologs from tomato and rice complemented viral infection. EXA1 dependency for potexviral infection was also conserved in tomato. These results indicate that EXA1 is necessary for effective accumulation of potexviruses and a lolavirus, and that the function of EXA1 in viral infection is conserved among diverse plant species.

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Claims 5

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Silencing an EXA1 homolog significantly reduced potexvirus accumulation in N. benthamiana.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
silencing of an EXA1 homologe0
Interactor
potexvirusesPotexviruse0pathogen
Gene
EXA1 homologe0
Outcome
accumulation of potexvirusese0
Direction
compromisede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗
Potexvirus
Potexvirus · Interactor · picture of the genus (one of its species)Middle1991 · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In N. benthamiana, silencing of an EXA1 homolog significantly compromised the accumulation of potexviruses and a lolavirus”

✓ located verbatim in the source · abstract, characters 790–912 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Silencing an EXA1 homolog significantly reduced lolavirus accumulation in N. benthamiana.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
silencing of an EXA1 homologe0
Interactor
a lolaviruse0pathogen
Gene
EXA1 homologe0
Outcome
accumulation of potexviruses and a lolaviruse0
Direction
compromisede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In N. benthamiana, silencing of an EXA1 homolog significantly compromised the accumulation of potexviruses and a lolavirus”

✓ located verbatim in the source · abstract, characters 790–912 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Transient expression of tomato EXA1 homologs complemented viral infection in N. benthamiana.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
transient expression of EXA1 homologs from tomatoe0
Gene
EXA1 homologs from tomatoe0
Outcome
viral infectione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In N. benthamiana, silencing of an EXA1 homolog significantly compromised the accumulation of potexviruses and a lolavirus, a close relative of potexviruses, whereas transient expression of EXA1 homologs from tomato and rice complemented viral infection”

✓ located verbatim in the source · abstract, characters 790–1043 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Transient expression of rice EXA1 homologs complemented viral infection in N. benthamiana.

Taxon
N. benthamianaNicotiana benthamianae0
Treatment
transient expression of EXA1 homologs from tomato and ricee0
Gene
EXA1 homologs from tomato and ricee0
Outcome
viral infectione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Nicotiana benthamiana
Nicotiana benthamiana · TaxonCharles Andres · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In N. benthamiana, silencing of an EXA1 homolog significantly compromised the accumulation of potexviruses and a lolavirus, a close relative of potexviruses, whereas transient expression of EXA1 homologs from tomato and rice complemented viral infection”

✓ located verbatim in the source · abstract, characters 790–1043 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

EXA1 dependence of potexvirus infection was conserved in tomato.

Interactor
potexvirale0pathogen
Gene
EXA1e0
Outcome
EXA1 dependency for potexviral infectione0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Solanum lycopersicum
Solanum lycopersicum · TaxonKod B · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“EXA1 dependency for potexviral infection was also conserved in tomato”

✓ located verbatim in the source · abstract, characters 1045–1114 · show in text ↑

loss of function · molecular: metabolites · Nicotiana benthamianaPositive and negative results

35 papers: 10 positive, 25 negative or no effect

9 papers in the same direction as this paper · 25 in the opposite direction

  1. negative
  2. negative
  3. no effect

31 papers more in this group

See all 35 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.