Paper · 2020 · BMC Plant Biology

Transcriptome analysis reveals ethylene-mediated defense responses to Fusarium oxysporum f. sp. cucumerinum infection in Cucumis sativus L.

Jingping Dong; Yuean Wang; Qianqian Xian; et al.

6
claims
9
verbatim quotes
72
citations
3
research areas
✓
Open access · cc-by

Abstract

BACKGROUND: Fusarium wilt, caused by Fusarium oxysporum f. sp. cucumerinum (Foc), is a severe disease affecting cucumber (Cucumis sativus L.) production worldwide, but mechanisms underlying Fusarium wilt resistance in cucumber remain unknown. To better understand of the defense mechanisms elicited in response to Foc inoculation, RNA sequencing-based transcriptomic profiling of responses of the Fusarium wilt-resistant cucumber line 'Rijiecheng' at 0, 24, 48, 96, and 192 h after Foc inoculation was performed. RESULTS: We identified 4116 genes that were differentially expressed between 0 h and other time points after inoculation. All ethylene-related and pathogenesis-related genes from the differentially expressed genes were filtered out. Real-time PCR analysis showed that ethylene-related genes were induced in response to Foc infection. Importantly, after Foc infection and exogenous application of ethephon, a donor of ethylene, the ethylene-related genes were highly expressed. In response to exogenous ethephon treatment in conjunction with Foc inoculation, the infection resistance of cucumber seedlings was enhanced and endogenous ethylene biosynthesis increased dramatically. CONCLUSION: Collectively, ethylene signaling pathways play a positive role in regulating the defense response of cucumber to Foc infection. The results provide insight into the cucumber Fusarium wilt defense mechanisms and provide valuable information for breeding new cucumber cultivars with enhanced Fusarium wilt tolerance.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Observationobservedoriginal resultmeasured

Claim · model-written summary

Foc inoculation yielded 4116 differentially expressed cucumber genes.

Taxon
cucumberCucumis sativust0
Treatment
inoculatione0
Outcome
genes that were differentially expressede0
Value
4116e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“We identified 4116 genes that were differentially expressed between 0 h and other time points after inoculation”

✓ located verbatim in the source · abstract, characters 522–633 · show in text ↑
t0

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 112–141 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Ethylene-related genes were induced after Foc infection.

Taxon
cucumberCucumis sativust0
Treatment
Foc infectione0
Interactor
Foce0pathogen
Gene
ethylene-related genese0
Outcome
ethylene-related genese0
Direction
inducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ethylene-related genes were induced in response to Foc infection”

✓ located verbatim in the source · abstract, characters 781–845 · show in text ↑
t0

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 112–141 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Foc infection plus ethephon strongly expressed ethylene-related genes.

Taxon
cucumberCucumis sativust0
Treatment
Foc infection and exogenous application of ethephone0
Interactor
Foce0pathogen
Gene
ethylene-related genese0
Outcome
ethylene-related genese0
Direction
highly expressede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“after Foc infection and exogenous application of ethephon, a donor of ethylene, the ethylene-related genes were highly expressed”

✓ located verbatim in the source · abstract, characters 860–988 · show in text ↑
t0

“cucumber (Cucumis sativus L.)”

✓ located verbatim in the source · abstract, characters 112–141 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ethephon with Foc inoculation enhanced cucumber seedling infection resistance.

Taxon
cucumberCucumis sativuse0
Treatment
exogenous ethephon treatment in conjunction with Foc inoculatione0
Interactor
Foce0pathogen
Outcome
infection resistance of cucumber seedlingse0
Direction
enhancede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In response to exogenous ethephon treatment in conjunction with Foc inoculation, the infection resistance of cucumber seedlings was enhanced and endogenous ethylene biosynthesis increased dramatically”

✓ located verbatim in the source · abstract, characters 990–1190 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Ethephon with Foc inoculation dramatically increased endogenous ethylene biosynthesis.

Taxon
cucumberCucumis sativuse0
Treatment
exogenous ethephon treatment in conjunction with Foc inoculatione0
Interactor
Foce0pathogen
Outcome
endogenous ethylene biosynthesise0
Direction
increased dramaticallye0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In response to exogenous ethephon treatment in conjunction with Foc inoculation, the infection resistance of cucumber seedlings was enhanced and endogenous ethylene biosynthesis increased dramatically”

✓ located verbatim in the source · abstract, characters 990–1190 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

The authors infer a positive regulatory role for ethylene signaling in cucumber defense against Foc.

Taxon
cucumberCucumis sativuse0
Interactor
Foce0pathogen
Outcome
defense response of cucumber to Foc infectione0
Qualifier
ethylene signaling pathwayse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Cucumis sativus
Cucumis sativus · TaxonH. Zell · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“ethylene signaling pathways play a positive role in regulating the defense response of cucumber to Foc infection”

✓ located verbatim in the source · abstract, characters 1218–1330 · show in text ↑

(2-chloroethyl)phosphonic acid · physiology: hormones · Cucumis sativus (cucumber)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. negative
See all 2 papers →

(2-chloroethyl)phosphonic acid · disease · Cucumis sativus (cucumber)Results agree

2 papers: 2 positive, 0 negative or no effect

1 paper in the same direction as this paper

  1. positive
See all 2 papers →

inoculation · disease · Cucumis sativus (cucumber)Positive and negative results

83 papers: 50 positive, 33 negative or no effect

49 papers in the same direction as this paper · 33 in the opposite direction

  1. negative
  2. negative
  3. negative

79 papers more in this group

See all 83 papers →

inoculation · physiology: hormones · Cucumis sativus (cucumber)Results agree

9 papers: 9 positive, 0 negative or no effect

8 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

5 papers more in this group

See all 9 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.