Paper · 2021 · The ISME Journal

The fungal root endophyte Serendipita vermifera displays inter-kingdom synergistic beneficial effects with the microbiota in Arabidopsis thaliana and barley

Lisa K Mahdi; Shingo Miyauchi; Charles Uhlmann; et al.

5
claims
13
verbatim quotes
65
citations
3
research areas
✓
Open access · cc-by

Abstract

Plant root-associated bacteria can confer protection against pathogen infection. By contrast, the beneficial effects of root endophytic fungi and their synergistic interactions with bacteria remain poorly defined. We demonstrate that the combined action of a fungal root endophyte from a widespread taxon with core bacterial microbiota members provides synergistic protection against an aggressive soil-borne pathogen in Arabidopsis thaliana and barley. We additionally reveal early inter-kingdom growth promotion benefits which are host and microbiota composition dependent. Using RNA-sequencing, we show that these beneficial activities are not associated with extensive host transcriptional reprogramming but rather with the modulation of expression of microbial effectors and carbohydrate-active enzymes.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 5

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Fungal and bacterial partners synergistically protected Arabidopsis against a soil pathogen.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Treatment
combined action of a fungal root endophyte from a widespread taxon with core bacterial microbiota memberse0
Interactor
soil-borne pathogene0pathogen
Second interactor
Serendipita vermiferaSerendipita vermiferat0symbiont
Outcome
synergistic protection against an aggressive soil-borne pathogene0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“combined action of a fungal root endophyte from a widespread taxon with core bacterial microbiota members provides synergistic protection against an aggressive soil-borne pathogen in Arabidopsis thaliana and barley”

✓ located verbatim in the source · abstract, characters 238–452 · show in text ↑
t0

“Serendipita vermifera”

✓ located verbatim in the source · title, characters 26–47 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Fungal and bacterial partners synergistically protected barley against a soil pathogen.

Treatment
combined action of a fungal root endophyte from a widespread taxon with core bacterial microbiota memberse0
Interactor
soil-borne pathogene0pathogen
Second interactor
Serendipita vermiferaSerendipita vermiferat0symbiont
Outcome
synergistic protection against an aggressive soil-borne pathogene0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“combined action of a fungal root endophyte from a widespread taxon with core bacterial microbiota members provides synergistic protection against an aggressive soil-borne pathogen in Arabidopsis thaliana and barley”

✓ located verbatim in the source · abstract, characters 238–452 · show in text ↑
t0

“Serendipita vermifera”

✓ located verbatim in the source · title, characters 26–47 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Early growth promotion depended on host and microbiota composition.

Taxon
Arabidopsis thaliana and barleyArabidopsis thalianaHordeum vulgaret0
Interactor
Serendipita vermiferaSerendipita vermiferat1symbiont
Outcome
growth promotion benefitse0
Qualifier
host and microbiota composition dependente0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“early inter-kingdom growth promotion benefits which are host and microbiota composition dependent”

✓ located verbatim in the source · abstract, characters 477–574 · show in text ↑
t0

“Arabidopsis thaliana and barley”

✓ located verbatim in the source · title, characters 125–156 · show in text ↑
t1

“Serendipita vermifera”

✓ located verbatim in the source · title, characters 26–47 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Benefits were not accompanied by extensive host transcriptional reprogramming.

Taxon
Arabidopsis thaliana and barleyArabidopsis thalianaHordeum vulgaret0
Interactor
Serendipita vermiferaSerendipita vermiferat1symbiont
Outcome
host transcriptional reprogramminge0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“these beneficial activities are not associated with extensive host transcriptional reprogramming”

✓ located verbatim in the source · abstract, characters 611–707 · show in text ↑
t0

“Arabidopsis thaliana and barley”

✓ located verbatim in the source · title, characters 125–156 · show in text ↑
t1

“Serendipita vermifera”

✓ located verbatim in the source · title, characters 26–47 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Benefits involved altered microbial effector and carbohydrate active enzyme expression.

Taxon
Arabidopsis thaliana and barleyArabidopsis thalianaHordeum vulgaret0
Interactor
Serendipita vermiferaSerendipita vermiferat1symbiont
Outcome
expression of microbial effectors and carbohydrate-active enzymese0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗
Hordeum vulgare
Hordeum vulgare · TaxonJackyM59 · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“modulation of expression of microbial effectors and carbohydrate-active enzymes”

✓ located verbatim in the source · abstract, characters 728–807 · show in text ↑
t0

“Arabidopsis thaliana and barley”

✓ located verbatim in the source · title, characters 125–156 · show in text ↑
t1

“Serendipita vermifera”

✓ located verbatim in the source · title, characters 26–47 · show in text ↑

inoculation · physiology: photosynthesis · Arabidopsis thaliana (thale cress)Positive and negative results

7 papers: 5 positive, 2 negative or no effect

4 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. no effect
  3. positive

3 papers more in this group

See all 7 papers →

inoculation · physiology: photosynthesis · Hordeum vulgare (barley)Positive and negative results

14 papers: 9 positive, 5 negative or no effect

8 papers in the same direction as this paper · 5 in the opposite direction

  1. negative
  2. negative
  3. negative

10 papers more in this group

See all 14 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.