Paper · 2021 · Archives of Microbiology

Phomopsis liquidambaris reduces ethylene biosynthesis in rice under salt stress via inhibiting the activity of 1-aminocyclopropane-1-carboxylate deaminase

M. A. Siddikee; M. I. Zereen; Mei Wu; et al.

8
claims
8
verbatim quotes
9
citations
3
research areas
✓
Open access · cc-by

Abstract

The endophytic fungus Phomopsis liquidambaris is characterized as a plant growth-promoting agent under salt stress, but its mechanism is unknown. Herein, 1-aminocyclopropane-1-carboxylate deaminase ( ACCD ) from the strain was confirmed that it had the ability of utilizing 1-aminocyclopropane-1-carboxylate as the sole nitrogen source. The full-length ACCD gene was 1152 bp, which encodes a mature protein of 384 amino acids with a molecular mass of 41.53 kDa. The ACCD activity was 3.9-fold in 3 mmol L −1 ACC by qRT-PCR under salt stress comparing with no salt tress. Ethylene production was increased to 34.55–70.60% and reduced the growth of rice by 23–69.73% under salt stress. Inoculation of P. liquidambaris increased root-shoot length, fresh and dry weight, and overall growth of stressed rice seedlings. ACC accumulation, ACC synthase and ACC oxidase activities increased in salt-treated rice seedlings, while they were significantly reduced when P. liquidambaris was inoculated into rice by qRT-PCR. It therefore can be concluded that P. liquidambaris can be used as a plant growth promoting fungus against salt stress and other biotic or abiotic stresses.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

Phomopsis liquidambaris ACCD could use ACC as its sole nitrogen source.

Interactor
straine0symbiont
Gene
ACCDe0
Outcome
utilizing 1-aminocyclopropane-1-carboxylate as the sole nitrogen sourcee0

Not reportedTaxon

Verbatim

e0

“1-aminocyclopropane-1-carboxylate deaminase ( ACCD ) from the strain was confirmed that it had the ability of utilizing 1-aminocyclopropane-1-carboxylate as the sole nitrogen source”

✓ located verbatim in the source · abstract, characters 154–335 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The ACCD gene is 1152 bp long and encodes a 384 amino acid protein of 41.53 kDa.

Gene
ACCDe0
Outcome
full-length ACCD genee0
Value
1152 bpe0

Not reportedTaxon

Verbatim

e0

“The full-length ACCD gene was 1152 bp, which encodes a mature protein of 384 amino acids with a molecular mass of 41.53 kDa”

✓ located verbatim in the source · abstract, characters 337–460 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

ACCD activity was 3.9-fold under salt stress compared with no salt stress.

Treatment
salt stresse0
Outcome
ACCD activitye0
Value
3.9-folde0
Comparator
no salt tresse0

Not reportedTaxonDirection

Verbatim

e0

“The ACCD activity was 3.9-fold in 3 mmol L −1 ACC by qRT-PCR under salt stress comparing with no salt tress”

✓ located verbatim in the source · abstract, characters 462–569 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Under salt stress, rice ethylene production increased by 34.55–70.60%.

Treatment
salt stresse0
Outcome
Ethylene productione0
Direction
increasede0
Value
34.55–70.60%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Ethylene production was increased to 34.55–70.60% and reduced the growth of rice by 23–69.73% under salt stress”

✓ located verbatim in the source · abstract, characters 571–682 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Under salt stress, rice growth fell by 23–69.73%.

Treatment
salt stresse0
Outcome
growth of ricee0
Direction
reducede0
Value
23–69.73%e0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Ethylene production was increased to 34.55–70.60% and reduced the growth of rice by 23–69.73% under salt stress”

✓ located verbatim in the source · abstract, characters 571–682 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with P. liquidambaris increased root and shoot length and fresh and dry weight of salt-stressed rice seedlings.

Taxon
rice seedlingsOryza sativae0
Treatment
Inoculation of P. liquidambarise0
Interactor
P. liquidambarisDiaporthe liquidambarise0symbiont
Outcome
root-shoot length, fresh and dry weighte0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Inoculation of P. liquidambaris increased root-shoot length, fresh and dry weight, and overall growth of stressed rice seedlings”

✓ located verbatim in the source · abstract, characters 684–812 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Inoculation with P. liquidambaris increased overall growth of salt-stressed rice seedlings.

Taxon
rice seedlingsOryza sativae0
Treatment
Inoculation of P. liquidambarise0
Interactor
P. liquidambarisDiaporthe liquidambarise0symbiont
Outcome
overall growthe0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Inoculation of P. liquidambaris increased root-shoot length, fresh and dry weight, and overall growth of stressed rice seedlings”

✓ located verbatim in the source · abstract, characters 684–812 · show in text ↑
Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

Salt increased rice seedling ACC accumulation and ACC synthase and oxidase activity, whereas fungal inoculation significantly reduced them.

Taxon
rice seedlingsOryza sativae0
Treatment
P. liquidambaris was inoculated into ricee0
Interactor
P. liquidambarisDiaporthe liquidambarise0symbiont
Outcome
ACC accumulation, ACC synthase and ACC oxidase activitiese0
Direction
reducede0
Comparator
salt-treated rice seedlingse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“ACC accumulation, ACC synthase and ACC oxidase activities increased in salt-treated rice seedlings, while they were significantly reduced when P. liquidambaris was inoculated into rice by qRT-PCR”

✓ located verbatim in the source · abstract, characters 814–1009 · show in text ↑

Diaporthe liquidambaris · growth · Oryza sativa (rice)Results agree

3 papers: 3 positive, 0 negative or no effect

2 papers in the same direction as this paper

  1. positive
  2. positive
See all 3 papers →

salinity · physiology: hormones · Oryza sativa (rice)Positive and negative results

3 papers: 2 positive, 1 negative or no effect

2 in the opposite direction

  1. positive
  2. positive
See all 3 papers →

inoculation · physiology: hormones · Oryza sativa (rice)Positive and negative results

13 papers: 9 positive, 4 negative or no effect

8 papers in the same direction as this paper · 4 in the opposite direction

  1. no effect
  2. negative
  3. no effect

9 papers more in this group

See all 13 papers →

salinity · growth · Oryza sativa (rice)Positive and negative results

296 papers: 37 positive, 259 negative or no effect

258 papers in the same direction as this paper · 37 in the opposite direction

  1. positive
  2. positive
  3. positive

292 papers more in this group

See all 296 papers →

inoculation · growth · Oryza sativa (rice)Positive and negative results

399 papers: 362 positive, 37 negative or no effect

361 papers in the same direction as this paper · 34 in the opposite direction · 3 reporting no difference from an alternative

  1. positive
  2. no effect
  3. negative

395 papers more in this group

See all 399 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.