Paper · 2021 · Plants

Comparison of Silicon-Evoked Responses on Arsenic Stress between Different Dular Rice Genotypes

Mohammad Reza Boorboori; Zhou Li; Xue Yan; et al.

8
claims
12
verbatim quotes
9
citations
2
research areas
✓
Open access · cc-by

Abstract

Arsenic is one of the most hazardous metalloids in nature, and due to its high water solubility, it is one of the most important causes of pollution. However, silicon reduces the uptake and transport of arsenic in rice. This study investigates the interaction of different arsenic and silicon levels on dry weight, protein content, and concentrations of arsenic and silicon in two different rice shoots and roots of Dular wild-type (DU-WT) and Dular Lsi1-overexpressed (DU-OE) rice. It should be noted that all seedlings were subjected to four different treatments. For RNA-seq and qPCR, the DU-WT genotype was selected as the control and DU-OE as the treatment. With the addition of silicone treatment, dry weight and protein content in the shoots and roots of both rice lines were increased, while the concentration of arsenic in these two organs was decreased. When seedlings were exposed to arsenic treatments, protein content, silicon concentration, and dry weight were decreased in both roots and shoots, while arsenic concentration was increased in both rice genotypes. The RNA-seq in DU-OE showed 5823 differentially expressed genes (DEGs), of which 2604 were up-regulated and 3219 down-regulated. Treatment of rice by arsenic and silicon has changed the expression of genes encoding cytokinin-responsive GATA transcription factor 1, protein IN2-1 homolog B, calcium-binding EGF domain-containing protein, Os01g0369700 protein, probable glutathione S-transferase GSTU1, glutathione S-transferase protein, Os09g0367700 protein, isocitrate dehydrogenase (NADP), and Os08g0522400 protein in the root of DU-OE. The present study's findings showed that in the presence of silicon, the transgenic genotype is much more resistant to arsenic than the wild genotype of Dular rice.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 8

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon increased shoot and root dry weight in both Dular rice lines.

Organ / stage
shoots and rootse0
Treatment
silicone treatmente0
Outcome
dry weighte0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“With the addition of silicone treatment, dry weight and protein content in the shoots and roots of both rice lines were increased”

✓ located verbatim in the source · abstract, characters 663–792 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon increased shoot and root protein content in both rice lines.

Treatment
silicone treatmente0
Outcome
protein contente0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“With the addition of silicone treatment, dry weight and protein content in the shoots and roots of both rice lines were increased”

✓ located verbatim in the source · abstract, characters 663–792 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Silicon decreased arsenic concentration in shoots and roots of both rice lines.

Treatment
Silicont0
Outcome
concentration of arsenice0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“while the concentration of arsenic in these two organs was decreased”

✓ located verbatim in the source · abstract, characters 794–862 · show in text ↑
t0

“Silicon-Evoked Responses on Arsenic Stress between Different Dular Rice Genotypes”

✓ located verbatim in the source · title, characters 14–95 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Arsenic treatment decreased protein content, silicon concentration and dry weight in roots and shoots of both rice genotypes.

Organ / stage
roots and shootse0
Treatment
arsenic treatmentse0
Outcome
protein content, silicon concentration, and dry weighte0
Direction
decreasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“When seedlings were exposed to arsenic treatments, protein content, silicon concentration, and dry weight were decreased in both roots and shoots”

✓ located verbatim in the source · abstract, characters 864–1009 · show in text ↑
t0

“Rice Genotypes”

✓ located verbatim in the source · title, characters 81–95 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Arsenic treatment increased arsenic concentration in both rice genotypes.

Treatment
arsenict0
Outcome
arsenic concentratione0
Direction
increasede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“while arsenic concentration was increased in both rice genotypes”

✓ located verbatim in the source · abstract, characters 1011–1075 · show in text ↑
t0

“Arsenic Stress”

✓ located verbatim in the source · title, characters 42–56 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

RNA sequencing found 5823 differentially expressed genes in DU-OE, 2604 up-regulated and 3219 down-regulated.

Material
DU-OEe0
Outcome
differentially expressed genese0
Value
5823e0
Qualifier
2604 were up-regulated and 3219 down-regulatede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The RNA-seq in DU-OE showed 5823 differentially expressed genes (DEGs), of which 2604 were up-regulated and 3219 down-regulated”

✓ located verbatim in the source · abstract, characters 1077–1204 · show in text ↑
t0

“Rice”

✓ located verbatim in the source · title, characters 81–85 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Arsenic and silicon treatment altered expression of the listed genes in DU-OE rice roots.

Material
DU-OEe0
Organ / stage
roote0
Treatment
arsenic and silicone0
Outcome
expression of genese0
Direction
changede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Treatment of rice by arsenic and silicon has changed the expression of genes encoding cytokinin-responsive GATA transcription factor 1, protein IN2-1 homolog B, calcium-binding EGF domain-containing protein, Os01g0369700 protein, probable glutathione S-transferase GSTU1, glutathione S-transferase protein, Os09g0367700 protein, isocitrate dehydrogenase (NADP), and Os08g0522400 protein in the root of DU-OE”

✓ located verbatim in the source · abstract, characters 1206–1613 · show in text ↑
Observationauthor interpretationoriginal resultpositivemeasured

Claim · model-written summary

With silicon, the transgenic Dular genotype was more resistant to arsenic than the wild genotype.

Outcome
resistant to arsenice0
Direction
much more resistante0
Qualifier
in the presence of silicone0
Comparator
wild genotypee0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“in the presence of silicon, the transgenic genotype is much more resistant to arsenic than the wild genotype of Dular rice”

✓ located verbatim in the source · abstract, characters 1656–1778 · show in text ↑

arsenic atom · molecular: metabolites · Oryza sativa (rice)Positive and negative results

15 papers: 8 positive, 7 negative or no effect

6 papers in the same direction as this paper · 8 in the opposite direction

  1. positive
  2. positive
  3. positive

11 papers more in this group

See all 15 papers →

silicon atom · molecular: metabolites · Oryza sativa (rice)Positive and negative results

77 papers: 66 positive, 11 negative or no effect

65 papers in the same direction as this paper · 9 in the opposite direction · 2 reporting no difference from an alternative

  1. no effect
  2. no effect
  3. no effect

73 papers more in this group

See all 77 papers →

arsenic atom · quality: protein · Oryza sativa (rice)Results agree

2 papers: 0 positive, 2 negative or no effect

1 paper in the same direction as this paper

  1. negative
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.