Paper · 2022 · Journal of Integrative Plant Biology

Salicylic acid biosynthesis is not from phenylalanine in Arabidopsis

Jie Wu; Wentao Zhu; Qiao Zhao

6
claims
10
verbatim quotes
85
citations
2
research areas
✓
Open access · cc-by-nc-nd

Abstract

SUMMARY The phytohormone salicylic acid (SA) regulates biotic and abiotic stress responses in plants. Two distinct biosynthetic pathways for SA have been well documented in plants: the isochorismate (IC) pathway in the chloroplast and the phenylalanine ammonia‐lyase (PAL) pathway in the cytosol. However, there has been no solid evidence that the PAL pathway contributes to SA biosynthesis. Here, we report that feeding Arabidopsis thaliana with Ring‐ 13 C‐labeled phenylalanine ( 13 C 6 ‐Phe) resulted in incorporation of the 13 C label not into SA, but into its isomer 4‐hydroxybenzoic acid (4‐HBA) instead. We obtained similar results when feeding 13 C 6 ‐Phe to the SA‐deficient ics1 ics2 mutant and the SA‐hyperaccumulating mutant s3h s5h . Notably, we detected 13 C 6 ‐SA when 13 C 6 ‐benzoic acid (BA) was provided, suggesting that SA can be synthesized from BA. Furthermore, despite the substantial accumulation of SA upon pathogen infection, we did not observe incorporation of 13 C label from Phe into SA. We also did not detect 13 C 6 ‐SA in PAL ‐overexpressing lines in the kfb01 kfb02 kfb39 kfb50 background after being fed 13 C 6 ‐Phe, although endogenous PAL levels were dramatically increased. Based on these combined results, we propose that SA biosynthesis is not from Phe in Arabidopsis . These results have important implications for our understanding of the SA biosynthetic pathway in land plants.

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Claims 6

Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Feeding phenylalanine labeled with 13C resulted in label incorporation into 4-hydroxybenzoic acid rather than into SA in Arabidopsis

Taxon
Arabidopsis thalianaArabidopsis thalianae1
Treatment
phenylalaninee1
Outcome
incorporation of the 13 C labele1
Qualifier
not into SAe1

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“feeding Arabidopsis thaliana with Ring‐ 13 C‐labeled phenylalanine ( 13 C 6 ‐Phe) resulted in incorporation of the 13 C label not into SA, but into its isomer 4‐hydroxybenzoic acid (4‐HBA) instead”

✓ located verbatim in the source · abstract, characters 413–609 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Similar label results were obtained after feeding 13C6-Phe to the ics1 ics2 SA-deficient mutant

Taxon
ArabidopsisArabidopsist0
Material
ics1 ics2e2
Treatment
Phee2
Outcome
similar resultse2

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in Arabidopsis”

✓ located verbatim in the source · title, characters 54–68 · show in text ↑
e2

“We obtained similar results when feeding 13 C 6 ‐Phe to the SA‐deficient ics1 ics2 mutant and the SA‐hyperaccumulating mutant s3h s5h”

✓ located verbatim in the source · abstract, characters 611–744 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Feeding benzoic acid to Arabidopsis produced detectable 13C6-labeled SA

Taxon
ArabidopsisArabidopsist0
Treatment
benzoic acid (BA)e3
Outcome
detected 13 C 6 ‐SAe3

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in Arabidopsis”

✓ located verbatim in the source · title, characters 54–68 · show in text ↑
e3

“Notably, we detected 13 C 6 ‐SA when 13 C 6 ‐benzoic acid (BA) was provided, suggesting that SA can be synthesized from BA”

✓ located verbatim in the source · abstract, characters 747–869 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Despite SA accumulation upon pathogen infection, no 13C label from Phe was incorporated into SA in Arabidopsis

Taxon
ArabidopsisArabidopsist0
Treatment
pathogen infectione4
Outcome
incorporation of 13 C label from Phe into SAe4

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in Arabidopsis”

✓ located verbatim in the source · title, characters 54–68 · show in text ↑
e4

“despite the substantial accumulation of SA upon pathogen infection, we did not observe incorporation of 13 C label from Phe into SA”

✓ located verbatim in the source · abstract, characters 884–1015 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

No 13C6-SA was detected in PAL-overexpressing lines fed 13C6-Phe, although PAL levels were dramatically increased

Taxon
ArabidopsisArabidopsist0
Material
kfb01 kfb02 kfb39 kfb50e5
Treatment
Phee5
Gene
PALe5
Outcome
13 C 6 ‐SAe5
Qualifier
although endogenous PAL levels were dramatically increasede5

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in Arabidopsis”

✓ located verbatim in the source · title, characters 54–68 · show in text ↑
e5

“We also did not detect 13 C 6 ‐SA in PAL ‐overexpressing lines in the kfb01 kfb02 kfb39 kfb50 background after being fed 13 C 6 ‐Phe, although endogenous PAL levels were dramatically increased”

✓ located verbatim in the source · abstract, characters 1017–1209 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

The authors propose that salicylic acid biosynthesis in Arabidopsis is not from phenylalanine

Taxon
ArabidopsisArabidopsise6
Outcome
SA biosynthesise6
Qualifier
not from Phee6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e6

“Based on these combined results, we propose that SA biosynthesis is not from Phe in Arabidopsis”

✓ located verbatim in the source · abstract, characters 1211–1306 · show in text ↑

infection · molecular: metabolites · ArabidopsisPositive and negative results

10 papers: 4 positive, 6 negative or no effect

5 papers in the same direction as this paper · 4 in the opposite direction

  1. positive
  2. positive
  3. positive

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.