Paper · 2022 · Frontiers in Plant Science

Identification and validation of quantitative trait loci for chlorophyll content of flag leaf in wheat under different phosphorus treatments

Bin Yang; Nan Chen; Yifei Dang; et al.

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claims
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verbatim quotes
16
citations
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research areas
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Open access · cc-by

Abstract

In wheat, the leaf chlorophyll content in flag leaves is closely related to the degree of phosphorus stress. Identifying major genes/loci associated with chlorophyll content in flag leaves under different phosphorus conditions is critical for breeding wheat varieties resistant to low phosphorus (P). Under normal, medium, and low phosphorus conditions, the chlorophyll content of flag leaves was investigated by a double haploid (DH) population derived from a cross between two popular wheat varieties Jinmai 47 and Jinmai 84, at different grain filling stages. Chlorophyll content of the DH population and parents decreased gradually during the S1 to the S3 stages and rapidly at the S4 stage. At the S4 stage, the chlorophyll content of the DH population under low phosphorus conditions was significantly lower than under normal phosphate conditions. Using a wheat 15K single-nucleotide polymorphism (SNP) panel, a total of 157 QTLs were found to be associated with chlorophyll content in flag leaf and were identified under three phosphorus conditions. The phenotypic variation explained (PVE) ranged from 3.07 to 31.66%. Under three different phosphorus conditions, 36, 30, and 48 QTLs for chlorophyll content were identified, respectively. Six major QTLs Qchl.saw-2B.1 , Qchl.saw-3B.1 , Qchl.saw-4D.1 , Qchl.saw-4D.2 , Qchl.saw-5A.9 and Qchl.saw-6A.4 could be detected under multiple phosphorus conditions in which Qchl.saw-4D.1 , Qchl.saw-4D.2 , and Qchl.saw-6A.4 were revealed to be novel major QTLs. Moreover, the closely linked SNP markers of Qchl.saw-4D.1 and Qchl.saw-4D.2 were validated as KASP markers in a DH population sharing the common parent Jinmai 84, showed extreme significance ( P < 0.01) in more than three environments under different phosphorus conditions, which has the potential to be utilized in molecular marker-assisted breeding for low phosphorus tolerance in wheat.

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Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

Flag-leaf chlorophyll content of the DH population and parents declined gradually from S1 to S3 and rapidly at S4.

Material
DH populatione1
Outcome
Chlorophyll contente1
Direction
decreasede1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“in wheat under different phosphorus treatments”

✓ located verbatim in the source · title, characters 94–140 · show in text ↑
e1

“Chlorophyll content of the DH population and parents decreased gradually during the S1 to the S3 stages and rapidly at the S4 stage”

✓ located verbatim in the source · abstract, characters 563–694 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

At the S4 stage, the DH population had significantly lower chlorophyll content under low phosphorus than under normal phosphate.

Treatment
low phosphorus conditionse2
Outcome
chlorophyll contente2
Direction
lowere2
Comparator
normal phosphate conditionse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In wheat”

✓ located verbatim in the source · abstract, characters 0–8 · show in text ↑
e2

“At the S4 stage, the chlorophyll content of the DH population under low phosphorus conditions was significantly lower than under normal phosphate conditions”

✓ located verbatim in the source · abstract, characters 696–852 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

A total of 157 QTLs were associated with flag-leaf chlorophyll content across three phosphorus conditions.

Gene
QTLse3
Outcome
chlorophyll content in flag leafe3
Value
157e3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In wheat”

✓ located verbatim in the source · abstract, characters 0–8 · show in text ↑
e3

“a total of 157 QTLs were found to be associated with chlorophyll content in flag leaf”

✓ located verbatim in the source · abstract, characters 916–1001 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The phenotypic variation explained by the chlorophyll QTLs ranged from 3.07% to 31.66%.

Outcome
phenotypic variation explainede4
Value
3.07 to 31.66%e4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In wheat”

✓ located verbatim in the source · abstract, characters 0–8 · show in text ↑
e4

“The phenotypic variation explained (PVE) ranged from 3.07 to 31.66%”

✓ located verbatim in the source · abstract, characters 1057–1124 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Under three phosphorus conditions, 36, 30 and 48 QTLs for chlorophyll content were identified.

Gene
QTLse5
Outcome
QTLs for chlorophyll contente5
Value
36, 30, and 48e5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In wheat”

✓ located verbatim in the source · abstract, characters 0–8 · show in text ↑
e5

“36, 30, and 48 QTLs for chlorophyll content were identified”

✓ located verbatim in the source · abstract, characters 1171–1230 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

QTLs Qchl.saw-2B.1, Qchl.saw-3B.1 and Qchl.saw-4D.1 could be detected under multiple phosphorus conditions.

Gene
Qchl.saw-2B.1 , Qchl.saw-3B.1 , Qchl.saw-4D.1e6
Outcome
could be detected under multiple phosphorus conditionse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In wheat”

✓ located verbatim in the source · abstract, characters 0–8 · show in text ↑
e6

“Six major QTLs Qchl.saw-2B.1 , Qchl.saw-3B.1 , Qchl.saw-4D.1 , Qchl.saw-4D.2 , Qchl.saw-5A.9 and Qchl.saw-6A.4 could be detected under multiple phosphorus conditions”

✓ located verbatim in the source · abstract, characters 1246–1411 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

QTLs Qchl.saw-4D.2, Qchl.saw-5A.9 and Qchl.saw-6A.4 could also be detected under multiple phosphorus conditions.

Gene
Qchl.saw-4D.2 , Qchl.saw-5A.9 and Qchl.saw-6A.4e6
Outcome
could be detected under multiple phosphorus conditionse6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In wheat”

✓ located verbatim in the source · abstract, characters 0–8 · show in text ↑
e6

“Six major QTLs Qchl.saw-2B.1 , Qchl.saw-3B.1 , Qchl.saw-4D.1 , Qchl.saw-4D.2 , Qchl.saw-5A.9 and Qchl.saw-6A.4 could be detected under multiple phosphorus conditions”

✓ located verbatim in the source · abstract, characters 1246–1411 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Qchl.saw-4D.1, Qchl.saw-4D.2 and Qchl.saw-6A.4 are novel major QTLs.

Gene
Qchl.saw-4D.1 , Qchl.saw-4D.2 , and Qchl.saw-6A.4e7
Outcome
novel major QTLse7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In wheat”

✓ located verbatim in the source · abstract, characters 0–8 · show in text ↑
e7

“Qchl.saw-4D.1 , Qchl.saw-4D.2 , and Qchl.saw-6A.4 were revealed to be novel major QTLs”

✓ located verbatim in the source · abstract, characters 1421–1507 · show in text ↑
Method / resourceobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

SNP markers closely linked to Qchl.saw-4D.1 and Qchl.saw-4D.2 were validated as KASP markers and were significant in more than three environments.

Gene
Qchl.saw-4D.1 and Qchl.saw-4D.2e1
Outcome
validated as KASP markerse1
Value
P < 0.01e2
Setting
more than three environmentse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“In wheat”

✓ located verbatim in the source · abstract, characters 0–8 · show in text ↑
e1

“the closely linked SNP markers of Qchl.saw-4D.1 and Qchl.saw-4D.2 were validated as KASP markers”

✓ located verbatim in the source · abstract, characters 1519–1615 · show in text ↑
e2

“showed extreme significance ( P < 0.01) in more than three environments”

✓ located verbatim in the source · abstract, characters 1672–1743 · show in text ↑
Recommendationauthor interpretationoriginal resultbasis n/a

Claim · model-written summary

The KASP markers could be used in marker-assisted breeding for low phosphorus tolerance in wheat.

Outcome
molecular marker-assisted breeding for low phosphorus tolerancee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“which has the potential to be utilized in molecular marker-assisted breeding for low phosphorus tolerance in wheat”

✓ located verbatim in the source · abstract, characters 1783–1897 · show in text ↑

phosphorus · physiology: pigments · Triticum aestivum (wheat)Positive and negative results

20 papers: 18 positive, 2 negative or no effect

1 paper in the same direction as this paper · 18 in the opposite direction

  1. positive
  2. positive
  3. positive

16 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.