Paper · 2023 · Horticulturae

Genome-Wide Identification and Expression Analysis of HSP70 Gene Family in Chrysanthemum lavandulifolium under Heat Stress

Mengru Yin; Rongqian Hu; Aiping Song; et al.

8
claims
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verbatim quotes
18
citations
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research areas
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Open access · cc-by

Abstract

As a molecular chaperone, HSP70 is widely involved in complex activities in plants. Under high temperature, drought, high salt, low temperature, heavy metals, and other stresses, HSP70 is rapidly synthesizes, stabilizes protein and biological macromolecular structures, and improves the stress resistance of plants. In this study, 83 ClHSP70 genes in Chrysanthemum lavandulifolium were identified based on the published Chrysanthemum lavandulifolium genome database. The genes were divided into six clusters based on a phylogenetic analysis, and the gene structures, conserved motifs, and functional domains were relatively conserved. Only two collinear genes were observed, and they formed a pair of duplicating genes. Multiple abiotic stress and phytohormone response elements were observed on the ClHSP70 promoter, such as temperature, drought, methyl jasmonate, abscisic acid, and other stress-related elements, and CpG islands were found on some ClHSP70 promoters, suggesting that they may be related to methylation modifications. Tissue expression analysis showed that the ClHSP70 genes were highly expressed in the roots. In addition, the gene expression changed significantly after 1 h of heat treatment and plays an important role in plant responses to temperature stress. The results of this study provide insights on the ClHSP70 gene family members and a theoretical basis for further research on functional analyses of the ClHSP70 gene family.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

The genome contained 83 ClHSP70 genes.

Taxon
Chrysanthemum lavandulifoliumChrysanthemum lavandulifoliume0
Gene
ClHSP70e0
Outcome
83 ClHSP70 genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum lavandulifolium
Chrysanthemum lavandulifolium · Taxon · picture from its Wikimedia Commons categoryGrrewa · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“83 ClHSP70 genes in Chrysanthemum lavandulifolium were identified”

✓ located verbatim in the source · abstract, characters 331–396 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The genes formed six phylogenetic clusters.

Taxon
Chrysanthemum lavandulifoliumChrysanthemum lavandulifoliumt0
Outcome
six clusterse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum lavandulifolium
Chrysanthemum lavandulifolium · Taxon · picture from its Wikimedia Commons categoryGrrewa · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“The genes were divided into six clusters based on a phylogenetic analysis”

✓ located verbatim in the source · abstract, characters 467–540 · show in text ↑
t0

“Chrysanthemum lavandulifolium”

✓ located verbatim in the source · title, characters 75–104 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Gene structures, motifs and domains were relatively conserved.

Taxon
Chrysanthemum lavandulifoliumChrysanthemum lavandulifoliumt0
Outcome
gene structures, conserved motifs, and functional domainse0
Direction
relatively conservede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum lavandulifolium
Chrysanthemum lavandulifolium · Taxon · picture from its Wikimedia Commons categoryGrrewa · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the gene structures, conserved motifs, and functional domains were relatively conserved”

✓ located verbatim in the source · abstract, characters 546–633 · show in text ↑
t0

“Chrysanthemum lavandulifolium”

✓ located verbatim in the source · title, characters 75–104 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Two collinear genes formed a duplicate pair.

Taxon
Chrysanthemum lavandulifoliumChrysanthemum lavandulifoliumt0
Outcome
two collinear genese0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum lavandulifolium
Chrysanthemum lavandulifolium · Taxon · picture from its Wikimedia Commons categoryGrrewa · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Only two collinear genes were observed, and they formed a pair of duplicating genes”

✓ located verbatim in the source · abstract, characters 635–718 · show in text ↑
t0

“Chrysanthemum lavandulifolium”

✓ located verbatim in the source · title, characters 75–104 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ClHSP70 promoters contained abiotic stress and phytohormone response elements.

Taxon
Chrysanthemum lavandulifoliumChrysanthemum lavandulifoliumt0
Gene
ClHSP70e0
Outcome
abiotic stress and phytohormone response elementse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum lavandulifolium
Chrysanthemum lavandulifolium · Taxon · picture from its Wikimedia Commons categoryGrrewa · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“Multiple abiotic stress and phytohormone response elements were observed on the ClHSP70 promoter”

✓ located verbatim in the source · abstract, characters 720–816 · show in text ↑
t0

“Chrysanthemum lavandulifolium”

✓ located verbatim in the source · title, characters 75–104 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Some ClHSP70 promoters contained CpG islands, suggesting possible methylation modification.

Taxon
Chrysanthemum lavandulifoliumChrysanthemum lavandulifoliumt0
Gene
ClHSP70e0
Outcome
CpG islandse0
Qualifier
may be related to methylation modificationse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum lavandulifolium
Chrysanthemum lavandulifolium · Taxon · picture from its Wikimedia Commons categoryGrrewa · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“CpG islands were found on some ClHSP70 promoters, suggesting that they may be related to methylation modifications”

✓ located verbatim in the source · abstract, characters 920–1034 · show in text ↑
t0

“Chrysanthemum lavandulifolium”

✓ located verbatim in the source · title, characters 75–104 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

ClHSP70 genes were highly expressed in roots.

Taxon
Chrysanthemum lavandulifoliumChrysanthemum lavandulifoliumt0
Organ / stage
rootse0
Gene
ClHSP70e0
Outcome
highly expressede0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum lavandulifolium
Chrysanthemum lavandulifolium · Taxon · picture from its Wikimedia Commons categoryGrrewa · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the ClHSP70 genes were highly expressed in the roots”

✓ located verbatim in the source · abstract, characters 1075–1127 · show in text ↑
t0

“Chrysanthemum lavandulifolium”

✓ located verbatim in the source · title, characters 75–104 · show in text ↑
Intervention effectobservedoriginal resultsignificant (as stated)measured

Claim · model-written summary

ClHSP70 expression changed significantly after one hour of heat treatment.

Taxon
Chrysanthemum lavandulifoliumChrysanthemum lavandulifoliumt0
Treatment
1 h of heat treatmente0
Outcome
gene expressione0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Chrysanthemum lavandulifolium
Chrysanthemum lavandulifolium · Taxon · picture from its Wikimedia Commons categoryGrrewa · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e0

“the gene expression changed significantly after 1 h of heat treatment”

✓ located verbatim in the source · abstract, characters 1142–1211 · show in text ↑
t0

“Chrysanthemum lavandulifolium”

✓ located verbatim in the source · title, characters 75–104 · show in text ↑