Paper · 2023 · IMA Fungus

Polydomus karssenii gen. nov. sp. nov. is a dark septate endophyte with a bifunctional lifestyle parasitising eggs of plant parasitic cyst nematodes (Heterodera spp.)

Samad Ashrafi; Jan-Peer Wennrich; Yvonne Becker; et al.

9
claims
17
verbatim quotes
21
citations
3
research areas
✓
Open access · cc-by

Abstract

In this study fungal strains were investigated, which had been isolated from eggs of the cereal cyst nematode Heterodera filipjevi, and roots of Microthlaspi perfoliatum (Brassicaceae). The morphology, the interaction with nematodes and plants and the phylogenetic relationships of these strains originating from a broad geographic range covering Western Europe to Asia Minor were studied. Phylogenetic analyses using five genomic loci including ITSrDNA, LSUrDNA, SSUrDNA, rpb2 and tef1-α were carried out. The strains were found to represent a distinct phylogenetic lineage most closely related to Equiseticola and Ophiosphaerella, and Polydomus karssenii (Phaeosphaeriaceae, Pleosporales) is introduced here as a new species representing a monotypic genus. The pathogenicity tests against nematode eggs fulfilled Koch's postulates using in vitro nematode bioassays and showed that the fungus could parasitise its original nematode host H. filipjevi as well as the sugar beet cyst nematode H. schachtii, and colonise cysts and eggs of its hosts by forming highly melanised moniliform hyphae. Light microscopic observations on fungus-root interactions in an axenic system revealed the capacity of the same fungal strain to colonise the roots of wheat and produce melanised hyphae and microsclerotia-like structure typical for dark septate endophytes. Confocal laser scanning microscopy further demonstrated that the fungus colonised the root cells by predominant intercellular growth of hyphae, and frequent formation of appressorium-like as well as penetration peg-like structures through internal cell walls surrounded by callosic papilla-like structures. Different strains of the new fungus produced a nearly identical set of secondary metabolites with various biological activities including nematicidal effects irrespective of their origin from plants or nematodes.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 9

Observationobservedoriginal resultmeasured

Claim · model-written summary

The strains represent a distinct phylogenetic lineage most closely related to Equiseticola and Ophiosphaerella.

Taxon
Microthlaspi perfoliatumMicrothlaspi perfoliatume1
Material
fungal strainse1
Outcome
distinct phylogenetic lineagee2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Microthlaspi perfoliatum
Microthlaspi perfoliatum · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“fungal strains were investigated, which had been isolated from eggs of the cereal cyst nematode Heterodera filipjevi, and roots of Microthlaspi perfoliatum (Brassicaceae)”

✓ located verbatim in the source · abstract, characters 14–184 · show in text ↑
e2

“The strains were found to represent a distinct phylogenetic lineage most closely related to Equiseticola and Ophiosphaerella, and Polydomus karssenii (Phaeosphaeriaceae, Pleosporales) is introduced here as a new species representing a monotypic genus”

✓ located verbatim in the source · abstract, characters 507–757 · show in text ↑
Observationobservedoriginal resultbasis n/a

Claim · model-written summary

Polydomus karssenii is introduced as a new species representing a monotypic genus.

Taxon
Microthlaspi perfoliatumMicrothlaspi perfoliatume1
Outcome
new speciese2
Qualifier
representing a monotypic genuse2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Microthlaspi perfoliatum
Microthlaspi perfoliatum · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“fungal strains were investigated, which had been isolated from eggs of the cereal cyst nematode Heterodera filipjevi, and roots of Microthlaspi perfoliatum (Brassicaceae)”

✓ located verbatim in the source · abstract, characters 14–184 · show in text ↑
e2

“The strains were found to represent a distinct phylogenetic lineage most closely related to Equiseticola and Ophiosphaerella, and Polydomus karssenii (Phaeosphaeriaceae, Pleosporales) is introduced here as a new species representing a monotypic genus”

✓ located verbatim in the source · abstract, characters 507–757 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The fungus parasitised eggs of its original host Heterodera filipjevi and of the sugar beet cyst nematode H. schachtii, fulfilling Koch's postulates in vitro.

Taxon
Microthlaspi perfoliatumMicrothlaspi perfoliatume1
Interactor
H. filipjeviHeterodera filipjevie3host
Second interactor
H. schachtiiHeterodera schachtiie3host
Outcome
parasitisee3
Qualifier
fulfilled Koch's postulates using in vitro nematode bioassayse3

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Microthlaspi perfoliatum
Microthlaspi perfoliatum · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“fungal strains were investigated, which had been isolated from eggs of the cereal cyst nematode Heterodera filipjevi, and roots of Microthlaspi perfoliatum (Brassicaceae)”

✓ located verbatim in the source · abstract, characters 14–184 · show in text ↑
e3

“The pathogenicity tests against nematode eggs fulfilled Koch's postulates using in vitro nematode bioassays and showed that the fungus could parasitise its original nematode host H. filipjevi as well as the sugar beet cyst nematode H. schachtii”

✓ located verbatim in the source · abstract, characters 759–1003 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The fungus colonised cysts and eggs of its hosts by forming highly melanised moniliform hyphae.

Taxon
Microthlaspi perfoliatumMicrothlaspi perfoliatume1
Outcome
colonise cysts and eggse4
Qualifier
by forming highly melanised moniliform hyphaee4

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Microthlaspi perfoliatum
Microthlaspi perfoliatum · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“fungal strains were investigated, which had been isolated from eggs of the cereal cyst nematode Heterodera filipjevi, and roots of Microthlaspi perfoliatum (Brassicaceae)”

✓ located verbatim in the source · abstract, characters 14–184 · show in text ↑
e4

“colonise cysts and eggs of its hosts by forming highly melanised moniliform hyphae”

✓ located verbatim in the source · abstract, characters 1009–1091 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The fungus colonised wheat roots.

Interactor
funguse5symbiont
Outcome
colonise the rootse5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“Light microscopic observations on fungus-root interactions in an axenic system revealed the capacity of the same fungal strain to colonise the roots of wheat and produce melanised hyphae and microsclerotia-like structure typical for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1093–1349 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The fungus produced melanised hyphae and microsclerotia-like structures in wheat roots.

Interactor
funguse5symbiont
Outcome
produce melanised hyphae and microsclerotia-like structuree5

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“Light microscopic observations on fungus-root interactions in an axenic system revealed the capacity of the same fungal strain to colonise the roots of wheat and produce melanised hyphae and microsclerotia-like structure typical for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1093–1349 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The fungus colonised root cells mainly by predominant intercellular growth of hyphae.

Interactor
funguse6symbiont
Outcome
predominant intercellular growth of hyphaee6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“Light microscopic observations on fungus-root interactions in an axenic system revealed the capacity of the same fungal strain to colonise the roots of wheat and produce melanised hyphae and microsclerotia-like structure typical for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1093–1349 · show in text ↑
e6

“Confocal laser scanning microscopy further demonstrated that the fungus colonised the root cells by predominant intercellular growth of hyphae”

✓ located verbatim in the source · abstract, characters 1351–1493 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The fungus formed appressorium-like and penetration peg-like structures through internal cell walls, surrounded by callosic papilla-like structures.

Interactor
funguse6symbiont
Outcome
appressorium-like as well as penetration peg-like structurese7
Qualifier
surrounded by callosic papilla-like structurese7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Triticum aestivum
Triticum aestivum · TaxonRasbak · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e5

“Light microscopic observations on fungus-root interactions in an axenic system revealed the capacity of the same fungal strain to colonise the roots of wheat and produce melanised hyphae and microsclerotia-like structure typical for dark septate endophytes”

✓ located verbatim in the source · abstract, characters 1093–1349 · show in text ↑
e6

“Confocal laser scanning microscopy further demonstrated that the fungus colonised the root cells by predominant intercellular growth of hyphae”

✓ located verbatim in the source · abstract, characters 1351–1493 · show in text ↑
e7

“frequent formation of appressorium-like as well as penetration peg-like structures through internal cell walls surrounded by callosic papilla-like structures”

✓ located verbatim in the source · abstract, characters 1499–1656 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Different strains of the new fungus produced a nearly identical set of secondary metabolites with various biological activities, including nematicidal effects, irrespective of their origin.

Taxon
Microthlaspi perfoliatumMicrothlaspi perfoliatume1
Material
strainse2
Outcome
a nearly identical set of secondary metabolitese2
Qualifier
various biological activities including nematicidal effects irrespective of their origin from plants or nematodese2

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Microthlaspi perfoliatum
Microthlaspi perfoliatum · TaxonKrzysztof Ziarnek, Kenraiz · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“fungal strains were investigated, which had been isolated from eggs of the cereal cyst nematode Heterodera filipjevi, and roots of Microthlaspi perfoliatum (Brassicaceae)”

✓ located verbatim in the source · abstract, characters 14–184 · show in text ↑
e2

“Different strains of the new fungus produced a nearly identical set of secondary metabolites with various biological activities including nematicidal effects irrespective of their origin from plants or nematodes”

✓ located verbatim in the source · abstract, characters 1658–1869 · show in text ↑