Paper · 2023 · Nature Communications

Cell type-specific mapping of ion distribution in Arabidopsis thaliana roots

Ricardo F. H. Giehl; Paulina Flis; Jörg Fuchs; et al.

6
claims
11
verbatim quotes
21
citations
2
research areas
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Open access · cc-by

Abstract

Cell type-specific mapping of element distribution is critical to fully understand how roots partition nutrients and toxic elements with aboveground parts. In this study, we developed a method that combines fluorescence-activated cell sorting (FACS) with inductively coupled plasma mass spectrometry (ICP-MS) to assess the ionome of different cell populations within Arabidopsis thaliana roots. The method reveals that most elements exhibit a radial concentration gradient increasing from the rhizodermis to inner cell layers, and detected previously unknown ionomic changes resulting from perturbed xylem loading processes. With this approach, we also identify a strong accumulation of manganese in trichoblasts of iron-deficient roots. We demonstrate that confining manganese sequestration in trichoblasts but not in endodermal cells efficiently retains manganese in roots, therefore preventing toxicity in shoots. These results indicate the existence of cell type-specific constraints for efficient metal sequestration in roots. Thus, our approach opens an avenue to investigate element compartmentation and transport pathways in plants.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

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Claims 6

Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

FACS combined with ICP-MS assessed ionomes of distinct Arabidopsis root cell populations.

Taxon
Arabidopsis thalianaArabidopsis thalianae0
Outcome
ionome of different cell populationse0

Not reportedComparatorValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“we developed a method that combines fluorescence-activated cell sorting (FACS) with inductively coupled plasma mass spectrometry (ICP-MS) to assess the ionome of different cell populations within Arabidopsis thaliana roots”

✓ located verbatim in the source · abstract, characters 171–393 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Most elements increased radially from rhizodermis toward inner root layers.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Organ / stage
rootst0
Outcome
radial concentration gradiente0
Direction
increasinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“most elements exhibit a radial concentration gradient increasing from the rhizodermis to inner cell layers”

✓ located verbatim in the source · abstract, characters 419–525 · show in text ↑
t0

“Arabidopsis thaliana roots”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

The method detected previously unknown ionomic changes following perturbed xylem loading.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
perturbed xylem loading processese0
Outcome
ionomic changese0

Not reportedComparatorValue

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“detected previously unknown ionomic changes resulting from perturbed xylem loading processes”

✓ located verbatim in the source · abstract, characters 531–623 · show in text ↑
t0

“Arabidopsis thaliana roots”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Manganese strongly accumulated in trichoblasts of iron-deficient roots.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Organ / stage
trichoblastse0
Outcome
accumulation of manganesee0
Direction
strong accumulatione0
Qualifier
iron-deficient rootse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“strong accumulation of manganese in trichoblasts of iron-deficient roots”

✓ located verbatim in the source · abstract, characters 664–736 · show in text ↑
t0

“Arabidopsis thaliana roots”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Confining manganese sequestration to trichoblasts retained manganese in roots.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
confining manganese sequestration in trichoblastse0
Outcome
manganese in rootse0
Direction
retainse0
Comparator
endodermal cellse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“confining manganese sequestration in trichoblasts but not in endodermal cells efficiently retains manganese in roots”

✓ located verbatim in the source · abstract, characters 758–874 · show in text ↑
t0

“Arabidopsis thaliana roots”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Confining manganese sequestration to trichoblasts prevented shoot toxicity.

Taxon
Arabidopsis thalianaArabidopsis thalianat0
Treatment
confining manganese sequestration in trichoblastse0
Outcome
toxicity in shootse0
Direction
preventinge0
Comparator
endodermal cellse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis thaliana
Arabidopsis thaliana · TaxonOriginal uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e0

“confining manganese sequestration in trichoblasts but not in endodermal cells efficiently retains manganese in roots, therefore preventing toxicity in shoots”

✓ located verbatim in the source · abstract, characters 758–915 · show in text ↑
t0

“Arabidopsis thaliana roots”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑

manganese atom · pest · Arabidopsis thaliana (thale cress)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. negative
See all 2 papers →

manganese atom · nutrient: content · Arabidopsis thaliana (thale cress)Positive and negative results

2 papers: 1 positive, 1 negative or no effect

1 in the opposite direction

  1. negative
See all 2 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.