Paper · 2023 · Proceedings of the National Academy of Sciences

A cell wall–localized cytokinin/purine riboside nucleosidase is involved in apoplastic cytokinin metabolism in Oryza sativa

Mikiko Kojima; Nobue Makita; Kazuki Miyata; et al.

7
claims
7
verbatim quotes
20
citations
4
research areas
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Open access · cc-by-nc-nd

Abstract

In the final step of cytokinin biosynthesis, the main pathway is the elimination of a ribose-phosphate moiety from the cytokinin nucleotide precursor by phosphoribohydrolase, an enzyme encoded by a gene named LONELY GUY (LOG). This reaction accounts for most of the cytokinin supply needed for regulating plant growth and development. In contrast, the LOG-independent pathway, in which dephosphorylation and deribosylation sequentially occur, is also thought to play a role in cytokinin biosynthesis, but the gene entity and physiological contribution have been elusive. In this study, we profiled the phytohormone content of chromosome segment substitution lines of Oryza sativa and searched for genes affecting the endogenous levels of cytokinin ribosides by quantitative trait loci analysis. Our approach identified a gene encoding an enzyme that catalyzes the deribosylation of cytokinin nucleoside precursors and other purine nucleosides. The cytokinin/purine riboside nucleosidase 1 (CPN1) we identified is a cell wall–localized protein. Loss-of-function mutations ( cpn1 ) were created by inserting a Tos17 -retrotransposon that altered the cytokinin composition in seedling shoots and leaf apoplastic fluid. The cpn1 mutation also abolished cytokinin riboside nucleosidase activity in leaf extracts and attenuated the trans -zeatin riboside-responsive expression of cytokinin marker genes. Grain yield of the mutants declined due to altered panicle morphology under field-grown conditions. These results suggest that the cell wall–localized LOG-independent cytokinin activating pathway catalyzed by CPN1 plays a role in cytokinin control of rice growth. Our finding broadens our spatial perspective of the cytokinin metabolic system.

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Claims 7

Observationobservedoriginal resultmeasured

Claim · model-written summary

A gene encoding an enzyme that deribosylates cytokinin nucleoside precursors and other purine nucleosides was identified.

Gene
a genee0
Outcome
deribosylation of cytokinin nucleoside precursors and other purine nucleosidese0

Not reportedTaxon

Verbatim

e0

“Our approach identified a gene encoding an enzyme that catalyzes the deribosylation of cytokinin nucleoside precursors and other purine nucleosides.”

✓ located verbatim in the source · abstract, characters 795–943 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

CPN1 is localized to the cell wall.

Gene
CPN1e0
Outcome
cell wall–localized proteine0

Not reportedTaxon

Verbatim

e0

“The cytokinin/purine riboside nucleosidase 1 (CPN1) we identified is a cell wall–localized protein.”

✓ located verbatim in the source · abstract, characters 944–1043 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

cpn1 mutations altered cytokinin composition in seedling shoots and leaf apoplastic fluid.

Organ / stage
seedling shoots and leaf apoplastic fluide0
Gene
cpn1e0
Outcome
cytokinin compositione0
Direction
alterede0

Not reportedTaxon

Verbatim

e0

“Loss-of-function mutations ( cpn1 ) were created by inserting a Tos17 -retrotransposon that altered the cytokinin composition in seedling shoots and leaf apoplastic fluid.”

✓ located verbatim in the source · abstract, characters 1044–1215 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The cpn1 mutation abolished cytokinin riboside nucleosidase activity in leaf extracts.

Organ / stage
leaf extractse0
Gene
cpn1e0
Outcome
cytokinin riboside nucleosidase activitye0
Direction
abolishede0

Not reportedTaxon

Verbatim

e0

“The cpn1 mutation also abolished cytokinin riboside nucleosidase activity in leaf extracts and attenuated the trans -zeatin riboside-responsive expression of cytokinin marker genes.”

✓ located verbatim in the source · abstract, characters 1216–1397 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

The cpn1 mutation attenuated trans-zeatin-riboside-responsive cytokinin marker gene expression.

Gene
cpn1e0
Outcome
trans -zeatin riboside-responsive expression of cytokinin marker genese0
Direction
attenuatede0

Not reportedTaxon

Verbatim

e0

“The cpn1 mutation also abolished cytokinin riboside nucleosidase activity in leaf extracts and attenuated the trans -zeatin riboside-responsive expression of cytokinin marker genes.”

✓ located verbatim in the source · abstract, characters 1216–1397 · show in text ↑
Observationobservedoriginal resultnegativemeasured

Claim · model-written summary

Grain yield declined in cpn1 mutants under field-grown conditions.

Material
mutantse0
Outcome
Grain yielde0
Direction
declinede0
Setting
field-grown conditionse0

Not reportedTaxon

Verbatim

e0

“Grain yield of the mutants declined due to altered panicle morphology under field-grown conditions.”

✓ located verbatim in the source · abstract, characters 1398–1497 · show in text ↑
Mechanismauthor interpretationoriginal resultmeasured

Claim · model-written summary

Altered panicle morphology was implicated in reduced grain yield of cpn1 mutants.

Material
mutantse0
Organ / stage
paniclee0
Outcome
Grain yielde0
Qualifier
altered panicle morphologye0

Not reportedTaxon

Verbatim

e0

“Grain yield of the mutants declined due to altered panicle morphology under field-grown conditions.”

✓ located verbatim in the source · abstract, characters 1398–1497 · show in text ↑