Paper · 2023 · South African Journal of Botany

Differential modulation of metabolites induced by salt stress in rice plants

Jesimiel da Silva Viana; Lineker de Sousa Lopes; Humberto Henrique de Carvalho; et al.

12
claims
27
verbatim quotes
5
citations
1
research areas
✓
Open access · cc-by

Abstract

Salinity is one of the abiotic stresses that most limit the growth and development of several crops, such as rice (Oryza sativa L.). According to previous studies, two rice cultivars, São Francisco (SF) and BRS Esmeralda (ES), exhibit contrasting salt stress tolerance in which the SF cultivar is more tolerant to salt stress than the ES cultivar at the pre-tillering stage. However, metabolic adjustments induced by differential tolerance remain to be explored. Hence, this study aimed to evaluate these cultivars under 80 mM NaCl assessing primary metabolism and physiological traits in the tillering stage in a not oxygenated nutrient solution. Salinity caused a significant increase of toxic ions negatively affecting plants' growth and photosynthesis parameters in both cultivars. Salinity reduced the total chlorophyll content, chlorophyll a fluorescence paraments, CO2 assimilation, stomatal conductance, and transpiration of both cultivars. On the other hand, carboxylation efficiency was increased only in SF cultivar. Overall, the physiological traits did not show differential tolerance to salinity in the tillering phase. Nevertheless, the metabolites modulation and activation of the GABA shunt in the SF leaves by salt stress were evident. Besides, 26 metabolites were differentially expressed in leaves and five in roots of the cultivars under salinity. Most of them were amino acids and key-sugars. In addition, glucopyranoside, lysine, ornithine, 2-aminoisobutyric, glutamine, arabitol, and 2-oxoglutaric acid were defined as potential biomarkers of salt stress in rice plants.

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Claims 12

Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Salinity caused a significant increase of toxic ions in both rice cultivars.

Taxon
rice plantsOryza sativat0
Treatment
Salinitye4
Outcome
toxic ionse4
Direction
increasee4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e4

“Salinity caused a significant increase of toxic ions negatively affecting plants' growth and photosynthesis parameters in both cultivars”

✓ located verbatim in the source · abstract, characters 648–784 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salinity reduced total chlorophyll content, chlorophyll a fluorescence parameters and CO2 assimilation in both cultivars.

Taxon
rice plantsOryza sativat0
Organ / stage
tillering stagee0
Treatment
80 mM NaCle0
Outcome
total chlorophyll content, chlorophyll a fluorescence paraments, CO2 assimilatione2
Direction
reducede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e0

“under 80 mM NaCl assessing primary metabolism and physiological traits in the tillering stage in a not oxygenated nutrient solution”

✓ located verbatim in the source · abstract, characters 515–646 · show in text ↑
e2

“Salinity reduced the total chlorophyll content, chlorophyll a fluorescence paraments, CO2 assimilation, stomatal conductance, and transpiration of both cultivars”

✓ located verbatim in the source · abstract, characters 786–947 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salinity reduced stomatal conductance and transpiration in both cultivars.

Taxon
rice plantsOryza sativat0
Treatment
80 mM NaCle0
Outcome
stomatal conductance, and transpiratione2
Direction
reducede2

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e0

“under 80 mM NaCl assessing primary metabolism and physiological traits in the tillering stage in a not oxygenated nutrient solution”

✓ located verbatim in the source · abstract, characters 515–646 · show in text ↑
e2

“Salinity reduced the total chlorophyll content, chlorophyll a fluorescence paraments, CO2 assimilation, stomatal conductance, and transpiration of both cultivars”

✓ located verbatim in the source · abstract, characters 786–947 · show in text ↑
Intervention effectobservedoriginal resultmeasured

Claim · model-written summary

Carboxylation efficiency increased under salinity only in the SF cultivar.

Taxon
rice plantsOryza sativat0
Material
SF cultivare3
Treatment
80 mM NaCle0
Outcome
carboxylation efficiencye3
Direction
increasede3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e0

“under 80 mM NaCl assessing primary metabolism and physiological traits in the tillering stage in a not oxygenated nutrient solution”

✓ located verbatim in the source · abstract, characters 515–646 · show in text ↑
e3

“On the other hand, carboxylation efficiency was increased only in SF cultivar”

✓ located verbatim in the source · abstract, characters 949–1026 · show in text ↑
Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Salinity did not produce differential tolerance between the two cultivars in the physiological traits at the tillering phase.

Taxon
rice plantsOryza sativat0
Organ / stage
tillering phasee5
Treatment
salinitye5
Outcome
differential tolerance to salinitye5
Direction
no_changeinferrede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e5

“Overall, the physiological traits did not show differential tolerance to salinity in the tillering phase”

✓ located verbatim in the source · abstract, characters 1028–1132 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Activation of the GABA shunt was evident in the SF leaves under salt stress.

Taxon
rice plantsOryza sativat0
Material
SFe6
Organ / stage
SF leavese6
Treatment
salt stresse6
Outcome
activation of the GABA shunte6

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e6

“the metabolites modulation and activation of the GABA shunt in the SF leaves by salt stress were evident”

✓ located verbatim in the source · abstract, characters 1148–1252 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

26 metabolites were differentially expressed in leaves under salinity.

Taxon
rice plantsOryza sativat0
Organ / stage
leavese7
Treatment
salinitye7
Outcome
metabolites were differentially expressede7
Value
26e7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e7

“26 metabolites were differentially expressed in leaves and five in roots of the cultivars under salinity”

✓ located verbatim in the source · abstract, characters 1263–1367 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Five metabolites were differentially expressed in roots under salinity.

Taxon
rice plantsOryza sativat0
Organ / stage
rootse7
Treatment
salinitye7
Outcome
metabolites were differentially expressede7
Value
fivee7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e7

“26 metabolites were differentially expressed in leaves and five in roots of the cultivars under salinity”

✓ located verbatim in the source · abstract, characters 1263–1367 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Most differentially expressed metabolites were amino acids and key sugars.

Taxon
rice plantsOryza sativat0
Outcome
amino acids and key-sugarse1
Qualifier
Most of theme1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e1

“Most of them were amino acids and key-sugars”

✓ located verbatim in the source · abstract, characters 1369–1413 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Glucopyranoside, lysine and ornithine were defined as potential biomarkers of salt stress in rice plants.

Taxon
rice plantsOryza sativat0
Compound
glucopyranoside, lysine, ornithinee1
Outcome
potential biomarkers of salt stresse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e1

“glucopyranoside, lysine, ornithine, 2-aminoisobutyric, glutamine, arabitol, and 2-oxoglutaric acid were defined as potential biomarkers of salt stress in rice plants”

✓ located verbatim in the source · abstract, characters 1428–1593 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

2-aminoisobutyric, glutamine and arabitol were defined as potential biomarkers of salt stress in rice plants.

Taxon
rice plantsOryza sativat0
Compound
2-aminoisobutyric, glutamine, arabitole1
Outcome
potential biomarkers of salt stresse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e1

“glucopyranoside, lysine, ornithine, 2-aminoisobutyric, glutamine, arabitol, and 2-oxoglutaric acid were defined as potential biomarkers of salt stress in rice plants”

✓ located verbatim in the source · abstract, characters 1428–1593 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

2-oxoglutaric acid was defined as a potential biomarker of salt stress in rice plants.

Taxon
rice plantsOryza sativat0
Compound
2-oxoglutaric acide1
Outcome
potential biomarkers of salt stresse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

t0

“salt stress in rice plants”

✓ located verbatim in the source · title, characters 50–76 · show in text ↑
e1

“glucopyranoside, lysine, ornithine, 2-aminoisobutyric, glutamine, arabitol, and 2-oxoglutaric acid were defined as potential biomarkers of salt stress in rice plants”

✓ located verbatim in the source · abstract, characters 1428–1593 · show in text ↑

sodium chloride · physiology: photosynthesis · Oryza sativa (rice)Positive and negative results

23 papers: 1 positive, 22 negative or no effect

21 papers in the same direction as this paper · 1 in the opposite direction

  1. positive
  2. negative
  3. no effect

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sodium chloride · physiology: gas exchange · Oryza sativa (rice)Results agree

5 papers: 0 positive, 5 negative or no effect

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  1. negative
  2. negative
  3. negative

1 paper more in this group

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salinity · disease · Oryza sativa (rice)Positive and negative results

25 papers: 16 positive, 9 negative or no effect

8 papers in the same direction as this paper · 16 in the opposite direction

  1. positive
  2. positive
  3. positive

21 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.