Paper · 2024 · Plants

Comparative Transcriptome Analysis Revealed Candidate Gene Modules Involved in Salt Stress Response in Sweet Basil and Overexpression of ObWRKY16 and ObPAL2 Enhanced Salt Tolerance of Transgenic Arabidopsis

Yukun Wang; Hong Ye; Fei Ren; et al.

6
claims
8
verbatim quotes
1
citations
2
research areas
✓
Open access · cc-by

Abstract

Sweet basil (Ocimum basilicum L.) is an important aromatic plant with high edibility and economic value, widely distributed in many regions of the tropics including the south of China. In recent years, environmental problems, especially soil salinization, have seriously restricted the planting and spread of sweet basil. However, the molecular mechanism of the salt stress response in sweet basil is still largely unknown. In this study, seed germination, seedling growth, and chlorophyll synthesis in sweet basil were inhibited under salt stress conditions. Through comparative transcriptome analysis, the gene modules involved in the metabolic processes, oxidative response, phytohormone signaling, cytoskeleton, and photosynthesis were screened out. In addition, the landscape of transcription factors during salt treatment in sweet basil was displayed as well. Moreover, the overexpression of the WRKY transcription factor-encoding gene, ObWRKY16, and the phenylalanine ammonia-lyase-encoding gene, ObPAL2, enhanced the seed germination, seedling growth, and survival rate, respectively, of transgenic Arabidopsis, suggesting that they might be important candidates for the creation of salt-tolerant sweet basil cultivars. Our data enrich the study on salt responses in sweet basil and provide essential gene resources for genetic improvements in sweet basil in the future.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 6

Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

Salt stress inhibited seed germination, seedling growth and chlorophyll synthesis in sweet basil.

Taxon
sweet basilOcimum basilicume1
Treatment
salt stress conditionse1
Outcome
seed germination, seedling growth, and chlorophyll synthesise1
Direction
inhibitede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ocimum basilicum
Ocimum basilicum · TaxonCastielli · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“seed germination, seedling growth, and chlorophyll synthesis in sweet basil were inhibited under salt stress conditions”

✓ located verbatim in the source · abstract, characters 439–558 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Comparative transcriptome analysis screened out gene modules involved in metabolic processes, oxidative response and phytohormone signaling in sweet basil under salt stress.

Taxon
sweet basilOcimum basilicumt0
Treatment
saltt0
Outcome
gene modules involved in the metabolic processes, oxidative response, phytohormone signalinge1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ocimum basilicum
Ocimum basilicum · TaxonCastielli · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Salt Stress Response in Sweet Basil”

✓ located verbatim in the source · title, characters 79–114 · show in text ↑
e1

“the gene modules involved in the metabolic processes, oxidative response, phytohormone signaling, cytoskeleton, and photosynthesis were screened out”

✓ located verbatim in the source · abstract, characters 604–752 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Comparative transcriptome analysis screened out gene modules involved in cytoskeleton and photosynthesis in sweet basil under salt stress.

Taxon
sweet basilOcimum basilicumt0
Treatment
saltt0
Outcome
cytoskeleton, and photosynthesise1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ocimum basilicum
Ocimum basilicum · TaxonCastielli · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

t0

“Salt Stress Response in Sweet Basil”

✓ located verbatim in the source · title, characters 79–114 · show in text ↑
e1

“the gene modules involved in the metabolic processes, oxidative response, phytohormone signaling, cytoskeleton, and photosynthesis were screened out”

✓ located verbatim in the source · abstract, characters 604–752 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The landscape of transcription factors during salt treatment was displayed for sweet basil.

Taxon
sweet basilOcimum basilicume1
Treatment
salt treatmente1
Outcome
landscape of transcription factorse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Ocimum basilicum
Ocimum basilicum · TaxonCastielli · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“the landscape of transcription factors during salt treatment in sweet basil was displayed”

✓ located verbatim in the source · abstract, characters 767–856 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Overexpression of ObWRKY16 enhanced seed germination and seedling growth of transgenic Arabidopsis.

Taxon
ArabidopsisArabidopsise1
Material
transgenic Arabidopsise1
Treatment
overexpressione1
Gene
ObWRKY16e1
Outcome
seed germination, seedling growthe1
Direction
enhancede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“the overexpression of the WRKY transcription factor-encoding gene, ObWRKY16, and the phenylalanine ammonia-lyase-encoding gene, ObPAL2, enhanced the seed germination, seedling growth, and survival rate, respectively, of transgenic Arabidopsis”

✓ located verbatim in the source · abstract, characters 876–1118 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Overexpression of ObPAL2 enhanced survival rate of transgenic Arabidopsis.

Taxon
ArabidopsisArabidopsise1
Material
transgenic Arabidopsise1
Treatment
overexpressione1
Gene
ObPAL2e1
Outcome
survival ratee1
Direction
enhancede1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Arabidopsis
Arabidopsis · Taxon · picture of the genus (one of its species)Original uploader was Brona at en.wikipedia . User:Roepers at nl.wikipedia · CC BY-SA 3.0 · Wikimedia Commons ↗

Verbatim

e1

“the overexpression of the WRKY transcription factor-encoding gene, ObWRKY16, and the phenylalanine ammonia-lyase-encoding gene, ObPAL2, enhanced the seed germination, seedling growth, and survival rate, respectively, of transgenic Arabidopsis”

✓ located verbatim in the source · abstract, characters 876–1118 · show in text ↑

salinity · physiology: pigments · Ocimum basilicum (basil)Positive and negative results

6 papers: 2 positive, 4 negative or no effect

3 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. positive
  3. negative

2 papers more in this group

See all 6 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.