Paper · 2024 · Journal of Advanced Research

An AP2/ERF transcription factor controls generation of the twin-seedling rice

Kaichong Teng; Neng Zhao; Yonghong Xie; et al.

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citations
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Open access · cc-by-nc-nd

Abstract

INTRODUCTION: The floret of rice is a main component of the spikelet, and the ovule of pistil is a critical organ for successful reproduction and determines the number of seeds. However, the molecular mechanisms underlying the ovule development remain elusive. OBJECTIVE: Twin-seedling rice has great potential for application in rice production. The study was to isolate the gene that controls twin-seedling in rice and explore the molecular function of the gene in floret development. METHODS: We discovered a twin-seedling rice (tsr) mutant and constructed different segregating populations to clone TSR gene using map-based cloning method. To explore the molecular functions of TSR in determination of the ovary number and development, we applied molecular technologies such as yeast two-hybrid assay, electrophoretic mobility shift assay (EMSA), and dual-LUC transient expression assay to search for the TSR-interacting proteins and the target genes regulated by TSR. RESULTS: We report here the map-based cloning of TSR which encodes an AP2/ERF transcription factor. Mutations in TSR lead to occurrence of the twin-seedling rice. The tsr mutant showed open hulls of the spikelets and displayed changes in the number of stamens and ovules of the florets. The ovary of tsr mutant contained two conjugated ovules which developed into a mature seed with two viable embryos. Mechanistic studies revealed that TSR regulates the expression levels of genes related to spikelet determination and ovule identity by binding to their promoters. Furthermore, TSR interacted with OsMADS1 and this interaction allowed OsMADS1 to modulate the transcriptional activityy of TSR on gene expression. The molecular study of TSR provides new insights into the formation and development of rice floret and helps breeders generate twin-seedling rice in production.

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Claims 8

Observationobservedoriginal resultmeasured

Claim · model-written summary

TSR was cloned and encodes an AP2/ERF transcription factor.

Gene
TSRe0
Outcome
encodes an AP2/ERF transcription factore0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“map-based cloning of TSR which encodes an AP2/ERF transcription factor”

✓ located verbatim in the source · abstract, characters 1001–1071 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 73–77 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

TSR mutations produced twin seedlings.

Gene
TSRe0
Outcome
twin-seedling ricee0

Not reportedDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“Mutations in TSR lead to occurrence of the twin-seedling rice”

✓ located verbatim in the source · abstract, characters 1073–1134 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The tsr mutant showed open spikelet hulls.

Material
tsr mutante0
Outcome
open hulls of the spikeletse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The tsr mutant showed open hulls of the spikelets”

✓ located verbatim in the source · abstract, characters 1136–1185 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 73–77 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The tsr mutant had changed stamen and ovule numbers.

Material
tsr mutante1
Outcome
changes in the number of stamens and ovules of the floretse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“displayed changes in the number of stamens and ovules of the florets”

✓ located verbatim in the source · abstract, characters 1190–1258 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 73–77 · show in text ↑
e1

“The tsr mutant showed open hulls of the spikelets”

✓ located verbatim in the source · abstract, characters 1136–1185 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The tsr ovary formed two conjugated ovules and a seed with two viable embryos.

Material
tsr mutante0
Outcome
two conjugated ovules which developed into a mature seed with two viable embryose0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“The ovary of tsr mutant contained two conjugated ovules which developed into a mature seed with two viable embryos”

✓ located verbatim in the source · abstract, characters 1260–1374 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 73–77 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

TSR binds promoters and regulates genes for spikelet determination and ovule identity.

Gene
TSRe0
Outcome
expression levels of genes related to spikelet determination and ovule identitye0
Qualifier
binding to their promoterse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“TSR regulates the expression levels of genes related to spikelet determination and ovule identity by binding to their promoters”

✓ located verbatim in the source · abstract, characters 1410–1537 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 73–77 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

TSR interacted with OsMADS1.

Gene
TSRe0
Outcome
interacted with OsMADS1e0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“TSR interacted with OsMADS1”

✓ located verbatim in the source · abstract, characters 1552–1579 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 73–77 · show in text ↑
Mechanismobservedoriginal resultmeasured

Claim · model-written summary

OsMADS1 interaction modulated TSR transcriptional activity.

Gene
OsMADS1e0
Outcome
transcriptional activityy of TSR on gene expressione0
Qualifier
this interactione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“this interaction allowed OsMADS1 to modulate the transcriptional activityy of TSR on gene expression”

✓ located verbatim in the source · abstract, characters 1584–1684 · show in text ↑
t0

“rice”

✓ located verbatim in the source · title, characters 73–77 · show in text ↑