Paper · 2025 · Microbiology Research

Microbial Biocontrol Agents Engineer Plant Biometrics and Host Response Against Xanthomonas oryzae pv. oryzae in Rice

Popy Bora; Sanjay Kumar Chetia; Anwesha Sharma; et al.

11
claims
18
verbatim quotes
0
citations
2
research areas
✓
Open access · cc-by

Abstract

Plant-beneficial microbes are a perennial ally in an agroecosystems, providing multiple benefits to crop plants. The present study explored the potential of two microbial biocontrol agents (MBCAs), viz., Trichoderma asperellum and Pseudomonas fluorescens, against the bacterial blight pathogen of rice, Xanthomonas oryzae pv. oryzae. In vitro, MBCAs resulted in significant inhibition of X. oryzae pv. oryzae, as evidenced through the distortion of pathogen cell morphology and formation of a pathogen biofilm. Pot studies on the effect of MBCAs in rice showed increased germination, increased vigor index of seedlings, increased tiller numbers, a 10.29% reduction in percentage disease incidence (PDI), and low disease severity following individual inoculation. Activity of plant defense enzymes also increased with MBCA treatment (phenylalanine ammonia-lyase, 2.7-fold increase; peroxidase and polyphenol oxidase, 5-fold increase), establishing the priming effect of MBCAs on host defense. The quantitative polymerase chain reaction data revealed that pathogenesis-related genes (OsPR1a, OsPR1b, and OsPR10a) and X. oryzae pv. oryzae resistance genes (Xa1 and Xa26) were upregulated 4- to 14-fold in MBCA-treated rice plants over control plants. These results provide insights into the phenological, physiological, and molecular responses of rice crops treated with MBCAs in the presence of X. oryzae pv. oryzae and could be used to develop an effective field management strategy.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 11

Intervention effectobservedoriginal resultpositivesignificant (as stated)measured

Claim · model-written summary

MBCAs significantly inhibited Xanthomonas oryzae pv. oryzae in vitro.

Treatment
MBCAse1
Interactor
Xanthomonas oryzae pv. oryzaeXanthomonas oryzae pv. oryzaee2pathogen
Second interactor
Trichoderma asperellum and Pseudomonas fluorescensPseudomonas fluorescensTrichoderma asperellume2biocontrol_agent
Outcome
inhibition of X. oryzae pv. oryzaee1
Direction
decreaseinferrede1
Setting
In vitroe1

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae · InteractorDonald Groth, Louisiana State University AgCenter, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · Second interactorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗
Trichoderma asperellum
Trichoderma asperellum · Second interactorTashkoskip · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e1

“In vitro, MBCAs resulted in significant inhibition of X. oryzae pv. oryzae, as evidenced through the distortion of pathogen cell morphology and formation of a pathogen biofilm”

✓ located verbatim in the source · abstract, characters 334–509 · show in text ↑
e2

“two microbial biocontrol agents (MBCAs), viz., Trichoderma asperellum and Pseudomonas fluorescens, against the bacterial blight pathogen of rice, Xanthomonas oryzae pv. oryzae”

✓ located verbatim in the source · abstract, characters 157–332 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

MBCA treatment increased germination of rice in pot studies.

Treatment
MBCAse3
Outcome
germinatione3
Direction
increasede3
Setting
Pot studiese3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e3

“Pot studies on the effect of MBCAs in rice showed increased germination, increased vigor index of seedlings, increased tiller numbers”

✓ located verbatim in the source · abstract, characters 511–644 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

MBCA treatment increased the vigor index of rice seedlings in pot studies.

Treatment
MBCAse3
Outcome
vigor index of seedlingse3
Direction
increasede3
Setting
Pot studiese3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e3

“Pot studies on the effect of MBCAs in rice showed increased germination, increased vigor index of seedlings, increased tiller numbers”

✓ located verbatim in the source · abstract, characters 511–644 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

MBCA treatment increased tiller numbers of rice in pot studies.

Treatment
MBCAse3
Outcome
tiller numberse3
Direction
increasede3
Setting
Pot studiese3

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e3

“Pot studies on the effect of MBCAs in rice showed increased germination, increased vigor index of seedlings, increased tiller numbers”

✓ located verbatim in the source · abstract, characters 511–644 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

MBCA treatment reduced percentage disease incidence of bacterial blight in rice by 10.29%.

Treatment
MBCAse3
Interactor
Xanthomonas oryzae pv. oryzaeXanthomonas oryzae pv. oryzaee2pathogen
Second interactor
Trichoderma asperellum and Pseudomonas fluorescensPseudomonas fluorescensTrichoderma asperellume2biocontrol_agent
Outcome
percentage disease incidence (PDI)e4
Direction
reductione4
Value
10.29%e4

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae · InteractorDonald Groth, Louisiana State University AgCenter, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗
Pseudomonas fluorescens
Pseudomonas fluorescens · Second interactorNinjatacoshell · CC BY-SA 3.0 · Wikimedia Commons ↗
Trichoderma asperellum
Trichoderma asperellum · Second interactorTashkoskip · CC BY-SA 4.0 · Wikimedia Commons ↗

Verbatim

e2

“two microbial biocontrol agents (MBCAs), viz., Trichoderma asperellum and Pseudomonas fluorescens, against the bacterial blight pathogen of rice, Xanthomonas oryzae pv. oryzae”

✓ located verbatim in the source · abstract, characters 157–332 · show in text ↑
e3

“Pot studies on the effect of MBCAs in rice showed increased germination, increased vigor index of seedlings, increased tiller numbers”

✓ located verbatim in the source · abstract, characters 511–644 · show in text ↑
e4

“a 10.29% reduction in percentage disease incidence (PDI)”

✓ located verbatim in the source · abstract, characters 646–702 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

Individual MBCA inoculation resulted in low disease severity of bacterial blight in rice.

Treatment
individual inoculatione5
Interactor
Xanthomonas oryzae pv. oryzaeXanthomonas oryzae pv. oryzaee2pathogen
Outcome
disease severitye5
Direction
lowerinferrede5

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae · InteractorDonald Groth, Louisiana State University AgCenter, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e2

“two microbial biocontrol agents (MBCAs), viz., Trichoderma asperellum and Pseudomonas fluorescens, against the bacterial blight pathogen of rice, Xanthomonas oryzae pv. oryzae”

✓ located verbatim in the source · abstract, characters 157–332 · show in text ↑
e5

“and low disease severity following individual inoculation”

✓ located verbatim in the source · abstract, characters 704–761 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

MBCA treatment increased phenylalanine ammonia-lyase activity 2.7-fold in rice.

Treatment
MBCA treatmente6
Outcome
phenylalanine ammonia-lyasee6
Direction
increasede6
Value
2.7-fold increasee6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e2

“two microbial biocontrol agents (MBCAs), viz., Trichoderma asperellum and Pseudomonas fluorescens, against the bacterial blight pathogen of rice, Xanthomonas oryzae pv. oryzae”

✓ located verbatim in the source · abstract, characters 157–332 · show in text ↑
e6

“Activity of plant defense enzymes also increased with MBCA treatment (phenylalanine ammonia-lyase, 2.7-fold increase; peroxidase and polyphenol oxidase, 5-fold increase)”

✓ located verbatim in the source · abstract, characters 763–932 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

MBCA treatment increased peroxidase and polyphenol oxidase activity 5-fold in rice.

Treatment
MBCA treatmente6
Outcome
peroxidase and polyphenol oxidasee6
Direction
increasede6
Value
5-fold increasee6

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e2

“two microbial biocontrol agents (MBCAs), viz., Trichoderma asperellum and Pseudomonas fluorescens, against the bacterial blight pathogen of rice, Xanthomonas oryzae pv. oryzae”

✓ located verbatim in the source · abstract, characters 157–332 · show in text ↑
e6

“Activity of plant defense enzymes also increased with MBCA treatment (phenylalanine ammonia-lyase, 2.7-fold increase; peroxidase and polyphenol oxidase, 5-fold increase)”

✓ located verbatim in the source · abstract, characters 763–932 · show in text ↑
Mechanismauthor interpretationoriginal resultpositivebasis n/a

Claim · model-written summary

MBCAs prime host defense in rice.

Treatment
MBCAse7
Outcome
host defensee7
Qualifier
priming effecte7

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗

Verbatim

e2

“two microbial biocontrol agents (MBCAs), viz., Trichoderma asperellum and Pseudomonas fluorescens, against the bacterial blight pathogen of rice, Xanthomonas oryzae pv. oryzae”

✓ located verbatim in the source · abstract, characters 157–332 · show in text ↑
e7

“establishing the priming effect of MBCAs on host defense”

✓ located verbatim in the source · abstract, characters 934–990 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

MBCA-treated rice upregulated pathogenesis-related genes 4- to 14-fold relative to control plants.

Treatment
MBCA-treatede0
Interactor
X. oryzae pv. oryzaeXanthomonas oryzae pv. oryzaee0pathogen
Gene
OsPR1a, OsPR1b, and OsPR10ae0
Outcome
pathogenesis-related genese0
Direction
upregulatede0
Value
4- to 14-folde0
Comparator
control plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae · InteractorDonald Groth, Louisiana State University AgCenter, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“pathogenesis-related genes (OsPR1a, OsPR1b, and OsPR10a) and X. oryzae pv. oryzae resistance genes (Xa1 and Xa26) were upregulated 4- to 14-fold in MBCA-treated rice plants over control plants”

✓ located verbatim in the source · abstract, characters 1054–1246 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

MBCA-treated rice upregulated resistance genes Xa1 and Xa26 4- to 14-fold relative to control plants.

Treatment
MBCA-treatede0
Interactor
X. oryzae pv. oryzaeXanthomonas oryzae pv. oryzaee0pathogen
Gene
Xa1 and Xa26e0
Outcome
resistance genese0
Direction
upregulatede0
Value
4- to 14-folde0
Comparator
control plantse0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Oryza sativa
Oryza sativa · Taxon · picture from its Wikimedia Commons categoryDesmanthus4food · CC BY-SA 3.0 us · Wikimedia Commons ↗
Xanthomonas oryzae pv. oryzae
Xanthomonas oryzae pv. oryzae · InteractorDonald Groth, Louisiana State University AgCenter, Bugwood.org · CC BY 3.0 us · Wikimedia Commons ↗

Verbatim

e0

“pathogenesis-related genes (OsPR1a, OsPR1b, and OsPR10a) and X. oryzae pv. oryzae resistance genes (Xa1 and Xa26) were upregulated 4- to 14-fold in MBCA-treated rice plants over control plants”

✓ located verbatim in the source · abstract, characters 1054–1246 · show in text ↑

biocontrol · growth · Oryza sativa (rice)Positive and negative results

17 papers: 16 positive, 1 negative or no effect

15 papers in the same direction as this paper · 1 in the opposite direction

  1. no effect
  2. positive
  3. positive

13 papers more in this group

See all 17 papers →

inoculation · Xanthomonas oryzae pv. oryzae · Oryza sativa (rice)Positive and negative results

18 papers: 16 positive, 2 negative or no effect

15 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive

14 papers more in this group

See all 18 papers →

biocontrol · yield · Oryza sativa (rice)Positive and negative results

26 papers: 24 positive, 2 negative or no effect

23 papers in the same direction as this paper · 1 in the opposite direction · 1 reporting no difference from an alternative

  1. negative
  2. no effect
  3. positive

22 papers more in this group

See all 26 papers →

biocontrol · Xanthomonas oryzae pv. oryzae · Oryza sativa (rice)Results agree

7 papers: 7 positive, 0 negative or no effect

6 papers in the same direction as this paper

  1. positive
  2. positive
  3. positive

3 papers more in this group

See all 7 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.