Paper · 2025 · Molecular Plant-Microbe Interactions

A Lipopolysaccharide Lipid A Acyltransferase Gene msbB Is Involved in Soybean Rhizobial Intracellular Colonization and Symbiotic Nitrogen Fixation

Ziqi Li; Yao Lu; Puxuan Du; et al.

10
claims
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verbatim quotes
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citations
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research areas
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Open access

Abstract

Three major components of lipopolysaccharide in rhizobia, namely core polysaccharide, o-antigen, and lipid A, often act as microbe-associated molecular patterns to participate in the symbiosis between rhizobia and legumes. Rhizobia have a different lipid A structure from other gram-negative bacteria. The 3-hydroxy group on the 2′ or 3′ myristate acyl chain of its lipid A is substituted by a unique very-long-chain fatty acid (VLCFA), 27-hydroxyoctacosanoic acid. VLCFAs are usually transferred to lipid A by an acyltransferase, MsbB. In this research, we constructed an msbB deletion mutant and complementary and overexpression strains of Sinorhizobium fredii HH103 and investigated their free-living and symbiotic phenotypes. The findings revealed that deletion of msbB had no impact on the autonomous growth of HH103 yet significantly reduced the resistance of rhizobia to abiotic stresses. Promoter-GUS assays revealed that msbB was mainly expressed at the early stage of nodulation. Quantitative analysis of early infection events revealed that the mutation of msbB significantly reduced root hair curling, infection threads, and nodule primordia, suggesting impairment of the symbiotic infection process. Nodulation assay and transmission electron microscopy analysis of the nodule ultrastructure further showed that msbB deletion led to the formation of small and ineffective root nodules without colonization of rhizobia, thereby causing a loss of nitrogen fixation capacity. RNA-seq analysis indicated that HH103Ω msbB inoculation may impair early symbiotic signaling and trigger a localized defense response in the soybean root to result in symbiotic deficiencies. Taken together, these results reveal the important role of VLCFAs in soybean rhizobia in the establishment of effective symbiosis and nodule nitrogen fixation. [Formula: see text] Copyright © 2025 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license .

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Claims 10

Intervention effectobservedoriginal resultno effectmeasured

Claim · model-written summary

Deleting msbB did not alter autonomous growth of rhizobia.

Taxon
SoybeanGlycine maxt0
Treatment
deletion of msbBe0
Interactor
HH103e0symbiont
Gene
msbBe0
Outcome
autonomous growth of HH103e0
Direction
no impacte0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“deletion of msbB had no impact on the autonomous growth of HH103”

✓ located verbatim in the source · abstract, characters 757–821 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

Deleting msbB reduced rhizobial resistance to abiotic stresses.

Taxon
SoybeanGlycine maxt0
Treatment
deletion of msbBe0
Interactor
rhizobiae0symbiont
Gene
msbBe0
Outcome
resistance of rhizobia to abiotic stressese0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“deletion of msbB had no impact on the autonomous growth of HH103 yet significantly reduced the resistance of rhizobia to abiotic stresses”

✓ located verbatim in the source · abstract, characters 757–894 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

msbB expression was mainly at the early nodulation stage.

Taxon
SoybeanGlycine maxt0
Organ / stage
early stage of nodulatione0
Gene
msbBe0
Outcome
mainly expressed at the early stage of nodulatione0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“msbB was mainly expressed at the early stage of nodulation”

✓ located verbatim in the source · abstract, characters 930–988 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

msbB mutation significantly reduced root hair curling.

Taxon
SoybeanGlycine maxt0
Treatment
mutation of msbBe0
Gene
msbBe0
Outcome
root hair curlinge0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“mutation of msbB significantly reduced root hair curling, infection threads, and nodule primordia”

✓ located verbatim in the source · abstract, characters 1056–1153 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

msbB mutation significantly reduced infection threads.

Taxon
SoybeanGlycine maxt0
Treatment
mutation of msbBe0
Gene
msbBe0
Outcome
infection threadse0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“mutation of msbB significantly reduced root hair curling, infection threads, and nodule primordia”

✓ located verbatim in the source · abstract, characters 1056–1153 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Intervention effectobservedoriginal resultnegativesignificant (as stated)measured

Claim · model-written summary

msbB mutation significantly reduced nodule primordia.

Taxon
SoybeanGlycine maxt0
Treatment
mutation of msbBe0
Gene
msbBe0
Outcome
nodule primordiae0
Direction
reducede0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“mutation of msbB significantly reduced root hair curling, infection threads, and nodule primordia”

✓ located verbatim in the source · abstract, characters 1056–1153 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

msbB deletion led to small and ineffective root nodules without rhizobial colonization.

Taxon
SoybeanGlycine maxt0
Organ / stage
root nodulese0
Treatment
msbB deletione0
Interactor
rhizobiae0symbiont
Gene
msbBe0
Outcome
small and ineffective root nodules without colonization of rhizobiae0

Not reportedComparatorDirection

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“msbB deletion led to the formation of small and ineffective root nodules without colonization of rhizobia”

✓ located verbatim in the source · abstract, characters 1325–1430 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Intervention effectobservedoriginal resultnegativemeasured

Claim · model-written summary

msbB deletion caused loss of nitrogen fixation capacity.

Taxon
SoybeanGlycine maxt0
Treatment
msbB deletione0
Interactor
rhizobiae0symbiont
Gene
msbBe0
Outcome
nitrogen fixation capacitye0
Direction
losse0

Not reportedComparator

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“msbB deletion led to the formation of small and ineffective root nodules without colonization of rhizobia, thereby causing a loss of nitrogen fixation capacity”

✓ located verbatim in the source · abstract, characters 1325–1484 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

HH103Ω msbB inoculation may impair early symbiotic signaling in soybean roots.

Taxon
SoybeanGlycine maxt0
Organ / stage
soybean roote0
Treatment
HH103Ω msbB inoculatione0
Interactor
HH103Ω msbBe0symbiont
Gene
msbBe0
Outcome
early symbiotic signalinge0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“HH103Ω msbB inoculation may impair early symbiotic signaling and trigger a localized defense response in the soybean root”

✓ located verbatim in the source · abstract, characters 1518–1639 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑
Mechanismauthor interpretationoriginal resultnegativemeasured

Claim · model-written summary

HH103Ω msbB inoculation may trigger a localized defense response in soybean roots.

Taxon
SoybeanGlycine maxt0
Organ / stage
soybean roote0
Treatment
HH103Ω msbB inoculatione0
Interactor
HH103Ω msbBe0symbiont
Gene
msbBe0
Outcome
localized defense response in the soybean roote0

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Glycine max
Glycine max · TaxonPublic domain · Wikimedia Commons ↗

Verbatim

e0

“HH103Ω msbB inoculation may impair early symbiotic signaling and trigger a localized defense response in the soybean root”

✓ located verbatim in the source · abstract, characters 1518–1639 · show in text ↑
t0

“Soybean”

✓ located verbatim in the source · title, characters 70–77 · show in text ↑

loss of function · growth · Glycine max (soybean)Positive and negative results

21 papers: 5 positive, 16 negative or no effect

15 papers in the same direction as this paper · 5 in the opposite direction

  1. positive
  2. positive
  3. positive

17 papers more in this group

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loss of function · symbiosis · Glycine max (soybean)Positive and negative results

31 papers: 5 positive, 26 negative or no effect

25 papers in the same direction as this paper · 5 in the opposite direction

  1. positive
  2. positive
  3. positive

27 papers more in this group

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loss of function · disease · Glycine max (soybean)Positive and negative results

37 papers: 17 positive, 20 negative or no effect

19 papers in the same direction as this paper · 17 in the opposite direction

  1. positive
  2. positive
  3. positive

33 papers more in this group

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Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.