Paper · 2025 · Agronomy

Identification and Analysis of Differentially Expressed Genes in Sugarcane Roots Under Different Potassium Application Levels

Rudan Li; Zhongfu Zhang; Yanye Li; et al.

10
claims
20
verbatim quotes
0
citations
4
research areas
✓
Open access · cc-by

Abstract

Potassium (K) is a critical macronutrient for sugarcane (Saccharum spp.), playing a vital role in metabolic processes, sucrose accumulation, and yield formation. Herein, this study systematically evaluated the effects of potassium oxide (K2O) application on sugarcane (cultivar YZ1696) growth at the seedling and tillering stages. Hydroponic experiments demonstrated that 6 mmol/L K2O optimally promoted seedling growth, whereas field trials revealed that 150 kg/ha K2O maximized growth rate, yield, and sucrose content. Sugarcane growth exhibited a biphasic response—stimulation followed by inhibition—with increasing K2O dosage at both developmental stages. Transcriptomic profiling of sugarcane roots under low-potassium (K-deficient), optimal potassium, and high-potassium conditions identified 10,266 differentially expressed genes (DEGs), with the most pronounced transcriptional shifts occurring under K deficiency. Functional enrichment analysis identified DEGs associated with potassium transport, calcium signaling, and carbohydrate metabolism. Notably, potassium uptake was mediated by distinct mechanisms: Shaker family channels (AKT1, AKT2, SPIKE) and the TPK family member KCO1 were induced under optimal K supply, whereas HAK/KUP/KT transporters (HAK1/5/10/21/25) exhibited broad activation across K concentrations, underscoring their key role in K homeostasis. Furthermore, calcium signaling genes (e.g., CIPK23) displayed K-dependent expression patterns. Weighted gene co-expression network analysis identified key gene modules that correlated strongly with agronomic traits, including plant height, yield, and sucrose content. Optimal K conditions favored the expression of yield- and sucrose-associated genes, suggesting a molecular basis for K-mediated productivity enhancement. Our findings revealed the genetic and physiological mechanisms underlying K-dependent sugarcane improvement, providing actionable insights for precise potassium fertilization to maximize the yield and sugar content.

Abstract from the paper’s OpenAlex record; open copy licensed cc-by. Read at the source ↗

The text the model read, with the source record’s inline markup (italics, sub- and superscripts) rendered and its character entities decoded; quote offsets refer to the raw text.

Claims 10

Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

6 mmol/L K2O optimally promoted seedling growth.

Taxon
sugarcanet0
Organ / stage
seedlinge0
Treatment
6 mmol/L K2Oe0
Outcome
seedling growthe0
Direction
optimally promotede0
Setting
Hydroponic experimentse0

Not reportedComparator

Verbatim

e0

“Hydroponic experiments demonstrated that 6 mmol/L K2O optimally promoted seedling growth, whereas field trials revealed that 150 kg/ha K2O maximized growth rate, yield, and sucrose content.”

✓ located verbatim in the source · abstract, characters 331–520 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Intervention effectobservedoriginal resultpositivemeasured

Claim · model-written summary

150 kg/ha K2O maximized field growth rate, yield and sucrose content.

Taxon
sugarcanet0
Treatment
150 kg/ha K2Oe0
Outcome
growth rate, yield, and sucrose contente0
Direction
maximizede0
Setting
field trialse0

Not reportedComparator

Verbatim

e0

“Hydroponic experiments demonstrated that 6 mmol/L K2O optimally promoted seedling growth, whereas field trials revealed that 150 kg/ha K2O maximized growth rate, yield, and sucrose content.”

✓ located verbatim in the source · abstract, characters 331–520 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Associationobservedoriginal resultmixedmeasured

Claim · model-written summary

Growth rose then fell as K2O dosage increased.

Taxon
Sugarcanet0
Treatment
increasing K2O dosagee0
Outcome
Sugarcane growthe0
Qualifier
stimulation followed by inhibitione0

Not reportedDirection

Verbatim

e0

“Sugarcane growth exhibited a biphasic response—stimulation followed by inhibition—with increasing K2O dosage at both developmental stages.”

✓ located verbatim in the source · abstract, characters 521–659 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Method / resourceobservedoriginal resultmeasured

Claim · model-written summary

Root profiling identified 10,266 DEGs, with the greatest shifts under K deficiency.

Taxon
sugarcanee0
Organ / stage
rootse0
Treatment
low-potassium (K-deficient), optimal potassium, and high-potassium conditionse0
Outcome
differentially expressed genes (DEGs)e0
Direction
most pronouncede0
Value
10,266e0
Qualifier
under K deficiencye0

Verbatim

e0

“Transcriptomic profiling of sugarcane roots under low-potassium (K-deficient), optimal potassium, and high-potassium conditions identified 10,266 differentially expressed genes (DEGs), with the most pronounced transcriptional shifts occurring under K deficiency.”

✓ located verbatim in the source · abstract, characters 660–922 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

DEGs were associated with potassium transport, calcium signaling and carbohydrate metabolism.

Taxon
Sugarcanet0
Outcome
DEGs associated with potassium transport, calcium signaling, and carbohydrate metabolisme0

Verbatim

e0

“Functional enrichment analysis identified DEGs associated with potassium transport, calcium signaling, and carbohydrate metabolism.”

✓ located verbatim in the source · abstract, characters 923–1054 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

AKT1, AKT2, SPIKE and KCO1 were induced at optimal K supply.

Taxon
Sugarcanet0
Treatment
optimal K supplye0
Gene
AKT1, AKT2, SPIKEe0
Outcome
were inducede0
Direction
inducede0
Qualifier
KCO1e0

Verbatim

e0

“Shaker family channels (AKT1, AKT2, SPIKE) and the TPK family member KCO1 were induced under optimal K supply”

✓ located verbatim in the source · abstract, characters 1118–1227 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

HAK transporters were broadly activated across K concentrations.

Taxon
Sugarcanet0
Treatment
K concentrationse0
Gene
HAK1/5/10/21/25e0
Outcome
broad activatione0
Direction
activatione0

Verbatim

e0

“HAK/KUP/KT transporters (HAK1/5/10/21/25) exhibited broad activation across K concentrations”

✓ located verbatim in the source · abstract, characters 1237–1329 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

CIPK23 showed K dependent expression.

Taxon
Sugarcanet0
Treatment
K-dependente0
Gene
CIPK23e0
Outcome
expression patternse0

Not reportedDirection

Verbatim

e0

“calcium signaling genes (e.g., CIPK23) displayed K-dependent expression patterns.”

✓ located verbatim in the source · abstract, characters 1390–1471 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Associationobservedoriginal resultmeasured

Claim · model-written summary

Gene modules correlated strongly with height, yield and sucrose content.

Taxon
Sugarcanet0
Gene
gene modulese0
Outcome
plant height, yield, and sucrose contente0

Not reportedDirection

Verbatim

e0

“Weighted gene co-expression network analysis identified key gene modules that correlated strongly with agronomic traits, including plant height, yield, and sucrose content.”

✓ located verbatim in the source · abstract, characters 1472–1644 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑
Associationobservedoriginal resultpositivemeasured

Claim · model-written summary

Optimal K favored expression of yield and sucrose associated genes.

Taxon
Sugarcanet0
Treatment
Optimal K conditionse0
Outcome
expression of yield- and sucrose-associated genese0
Direction
favorede0

Verbatim

e0

“Optimal K conditions favored the expression of yield- and sucrose-associated genes, suggesting a molecular basis for K-mediated productivity enhancement.”

✓ located verbatim in the source · abstract, characters 1645–1798 · show in text ↑
t0

“Sugarcane”

✓ located verbatim in the source · title, characters 65–74 · show in text ↑

potassium · quality: sugar starch · Saccharum officinarum (sugarcane)Results differ

18 papers: 16 positive, 2 negative or no effect

15 papers in the same direction as this paper · 2 in the opposite direction

  1. positive
  2. no effect
  3. no effect

14 papers more in this group

See all 18 papers →

potassium · growth · Saccharum officinarum (sugarcane)Positive and negative results

21 papers: 19 positive, 2 negative or no effect

18 papers in the same direction as this paper · 2 in the opposite direction

  1. negative
  2. negative
  3. positive

17 papers more in this group

See all 21 papers →

Claims are grouped by organism, treatment and what was measured or targeted. A paper counts as positive when any of its claims in the group is positive.