Paper · 2026 · Annals of Botany

The X-ray crystal structure and biochemical analysis of a native basic pathogenesis-related-1 protein from Mucuna sempervirens (Fabaceae) floral nectar

Hong-Guang Zha; Peng Cui; Ying Yu; et al.

10
claims
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verbatim quotes
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citations
4
research areas
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Open access

Abstract

BACKGROUND AND AIMS: Pathogenesis-Related 1 (PR-1) proteins are small secreted proteins that typically accumulate upon pathogen attack and serve as hallmarks of plant immune activation. Despite their widespread use as defence markers, their biochemical properties and native structural features remain largely unresolved. This study aimed to isolate, characterize and determine the crystal structure of a native PR-1 protein (MsPR-1b) that predominates in the floral nectar of Mucuna sempervirens, a woody leguminous vine, to provide insight into the molecular diversity and possible functional specialization of PR-1 proteins. METHODS: MsPR-1b was purified from raw nectar using ion-exchange and size-exclusion chromatography. The purified protein was analysed for molecular mass and glycosylation status, and its three-dimensional structure was determined by X-ray crystallography at 2.0 Å resolution. The full-length complementary DNA sequence was obtained through 3' and 5' rapid amplification of complementary DNA ends PCR, and tissue-specific expression was examined by quantitative PCR. Lipid-binding ability and antimicrobial activity were assessed by fluorescence spectroscopy and the disc diffusion method, respectively. KEY RESULTS: The MsPR-1b gene encodes a 164-amino-acid precursor containing an N-terminal signal peptide. Expression was detected predominantly in the nectary. The mature MsPR-1b is a small basic secreted protein (15 134 Da, pI 9.4) that lacks glycosylation. The crystal structure, representing the first native PR-1 protein purified from its natural source, revealed a homodimer. Each monomer adopts the conserved α-β-α sandwich fold characteristic of the CAP superfamily and contains two intrachain disulphide bonds. MsPR-1b displays no detectable lipid-binding capacity or direct antimicrobial activity. CONCLUSIONS: MsPR-1b provides the first structural view of a native plant PR-1 protein and indicates that nectar-secreted PR-1s might perform specialized, non-defensive functions distinct from canonical pathogen-related roles.

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Claims 10

Observationobservedoriginal resultmeasured

Claim · model-written summary

The MsPR-1b gene of Mucuna sempervirens encodes a 164-amino-acid precursor with an N-terminal signal peptide.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Gene
MsPR-1b genee1
Outcome
164-amino-acid precursor containing an N-terminal signal peptidee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“The MsPR-1b gene encodes a 164-amino-acid precursor containing an N-terminal signal peptide”

✓ located verbatim in the source · abstract, characters 1244–1335 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

MsPR-1b expression in Mucuna sempervirens was detected predominantly in the nectary.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Organ / stage
nectarye1
Outcome
Expression was detected predominantlye1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“Expression was detected predominantly in the nectary”

✓ located verbatim in the source · abstract, characters 1337–1389 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The mature MsPR-1b is a small basic secreted protein of 15 134 Da.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Gene
MsPR-1be1
Outcome
small basic secreted proteine1
Value
15 134 Dae1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“The mature MsPR-1b is a small basic secreted protein (15 134 Da, pI 9.4) that lacks glycosylation”

✓ located verbatim in the source · abstract, characters 1391–1488 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The mature MsPR-1b has a pI of 9.4.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Gene
MsPR-1be1
Outcome
pIe1
Value
9.4e1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“The mature MsPR-1b is a small basic secreted protein (15 134 Da, pI 9.4) that lacks glycosylation”

✓ located verbatim in the source · abstract, characters 1391–1488 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The mature MsPR-1b lacks glycosylation.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Gene
MsPR-1be1
Outcome
lacks glycosylatione1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“The mature MsPR-1b is a small basic secreted protein (15 134 Da, pI 9.4) that lacks glycosylation”

✓ located verbatim in the source · abstract, characters 1391–1488 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

The crystal structure of native MsPR-1b, the first native PR-1 protein purified from its natural source, revealed a homodimer.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Outcome
homodimere1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“The crystal structure, representing the first native PR-1 protein purified from its natural source, revealed a homodimer”

✓ located verbatim in the source · abstract, characters 1490–1610 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Each MsPR-1b monomer adopts the conserved α-β-α sandwich fold characteristic of the CAP superfamily.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Outcome
conserved α-β-α sandwich folde1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“Each monomer adopts the conserved α-β-α sandwich fold characteristic of the CAP superfamily”

✓ located verbatim in the source · abstract, characters 1612–1703 · show in text ↑
Observationobservedoriginal resultmeasured

Claim · model-written summary

Each MsPR-1b monomer contains two intrachain disulphide bonds.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Outcome
two intrachain disulphide bondse1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“Each monomer adopts the conserved α-β-α sandwich fold characteristic of the CAP superfamily and contains two intrachain disulphide bonds”

✓ located verbatim in the source · abstract, characters 1612–1748 · show in text ↑
Observationobservedoriginal resultno effectmeasured

Claim · model-written summary

MsPR-1b displayed no detectable lipid-binding capacity or direct antimicrobial activity.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Gene
MsPR-1be1
Outcome
lipid-binding capacity or direct antimicrobial activitye1
Direction
no detectablee1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“MsPR-1b displays no detectable lipid-binding capacity or direct antimicrobial activity”

✓ located verbatim in the source · abstract, characters 1750–1836 · show in text ↑
Mechanismhypothesisoriginal resultbasis n/a

Claim · model-written summary

The authors suggest that nectar-secreted PR-1s might perform specialized, non-defensive functions distinct from canonical pathogen-related roles.

Taxon
Mucuna sempervirensMucuna sempervirenst0
Outcome
specialized, non-defensive functionse1
Qualifier
might performe1

Organisms pictured · Representative pictures of the matched species, not figures from the paper.

Mucuna sempervirens
Mucuna sempervirens · Taxon阿橋 HQ · CC BY-SA 2.0 · Wikimedia Commons ↗

Verbatim

t0

“Mucuna sempervirens”

✓ located verbatim in the source · title, characters 107–126 · show in text ↑
e1

“nectar-secreted PR-1s might perform specialized, non-defensive functions distinct from canonical pathogen-related roles”

✓ located verbatim in the source · abstract, characters 1944–2063 · show in text ↑